Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 LINC00888-204ENST00000487386 421 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 NIPA2P2-201ENST00000496376 1083 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 TXNP6-201ENST00000510190 310 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 AC021733.2-201ENST00000518830 497 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 AC061975.8-201ENST00000587058 721 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 MIR6845-201ENST00000613182 61 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 AL512643.1-201ENST00000635735 524 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOPBP1Q92547 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 SNORA80E-201ENST00000384744 137 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 AL158825.1-201ENST00000414735 521 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 RPL23AP74-201ENST00000437246 471 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.95□□□□□ -1.78
TOPBP1Q92547 FRG1DP-201ENST00000635586 771 ntBASIC3.95□□□□□ -1.78
TOPBP1Q92547 CDC27P2-201ENST00000425026 1922 ntBASIC3.94□□□□□ -1.78
TOPBP1Q92547 ZNF355P-201ENST00000427301 3216 ntBASIC3.94□□□□□ -1.78
TOPBP1Q92547 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOPBP1Q92547 RNU1-91P-201ENST00000364746 163 ntBASIC3.94□□□□□ -1.78
TOPBP1Q92547 RNA5SP88-201ENST00000365560 109 ntBASIC3.94□□□□□ -1.78
TOPBP1Q92547 MIR137-201ENST00000385223 102 ntBASIC3.94□□□□□ -1.78
TOPBP1Q92547 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TOPBP1Q92547 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.94□□□□□ -1.78
TOPBP1Q92547 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.94□□□□□ -1.78
TOPBP1Q92547 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TOPBP1Q92547 AC103710.2-201ENST00000609912 942 ntBASIC3.94□□□□□ -1.78
TOPBP1Q92547 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TOPBP1Q92547 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TOPBP1Q92547 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TOPBP1Q92547 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 AL023284.1-201ENST00000403956 276 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 AL162578.1-201ENST00000406202 378 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 RN7SKP32-201ENST00000410167 303 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 HMGB1P48-201ENST00000446155 598 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 HSPE1P18-201ENST00000517602 280 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 MTCYBP28-201ENST00000566728 1132 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 AL137072.1-201ENST00000603444 466 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 AC067747.1-201ENST00000608026 250 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 AP001005.3-201ENST00000622049 129 ntBASIC3.93□□□□□ -1.78
TOPBP1Q92547 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.93□□□□□ -1.78
TOPBP1Q92547 AL591416.1-201ENST00000404015 867 ntBASIC3.92□□□□□ -1.78
TOPBP1Q92547 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.92□□□□□ -1.78
TOPBP1Q92547 AL121882.1-201ENST00000422893 417 ntBASIC3.92□□□□□ -1.78
TOPBP1Q92547 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOPBP1Q92547 AC103975.1-201ENST00000482506 483 ntBASIC3.92□□□□□ -1.78
TOPBP1Q92547 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.92□□□□□ -1.78
TOPBP1Q92547 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.92□□□□□ -1.78
TOPBP1Q92547 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.92□□□□□ -1.78
TOPBP1Q92547 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.92□□□□□ -1.78
TOPBP1Q92547 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOPBP1Q92547 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.92□□□□□ -1.78
TOPBP1Q92547 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TOPBP1Q92547 MTND5P19-201ENST00000424872 1794 ntBASIC3.92□□□□□ -1.78
TOPBP1Q92547 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TOPBP1Q92547 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
TOPBP1Q92547 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.91□□□□□ -1.78
TOPBP1Q92547 ATG3P1-201ENST00000419507 911 ntBASIC3.91□□□□□ -1.78
TOPBP1Q92547 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.91□□□□□ -1.78
TOPBP1Q92547 GMCL1P2-201ENST00000605230 823 ntBASIC3.91□□□□□ -1.78
TOPBP1Q92547 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.91□□□□□ -1.78
TOPBP1Q92547 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TOPBP1Q92547 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
TOPBP1Q92547 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.9□□□□□ -1.78
TOPBP1Q92547 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
TOPBP1Q92547 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.9□□□□□ -1.78
TOPBP1Q92547 AL450263.2-201ENST00000439400 589 ntBASIC3.9□□□□□ -1.78
TOPBP1Q92547 NPM1P49-201ENST00000448027 714 ntBASIC3.9□□□□□ -1.78
TOPBP1Q92547 RPL23AP11-201ENST00000475260 469 ntBASIC3.9□□□□□ -1.78
TOPBP1Q92547 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.9□□□□□ -1.78
TOPBP1Q92547 AC055876.1-202ENST00000567053 138 ntBASIC3.9□□□□□ -1.78
TOPBP1Q92547 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TOPBP1Q92547 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TOPBP1Q92547 Y_RNA.40-201ENST00000362645 93 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.9□□□□□ -1.79
TOPBP1Q92547 RPL31P45-201ENST00000419532 356 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.9□□□□□ -1.79
TOPBP1Q92547 RPL23AP42-201ENST00000471152 471 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 RN7SL297P-201ENST00000483161 293 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TOPBP1Q92547 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.9□□□□□ -1.79
TOPBP1Q92547 AC110741.2-201ENST00000605278 268 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 AC023813.4-201ENST00000607580 580 ntBASIC3.9□□□□□ -1.79
TOPBP1Q92547 AC004825.2-201ENST00000616634 455 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms