Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC009487.2-201ENST00000420969 6821 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHD6Q8TD26 MTND5P3-201ENST00000438536 1800 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 AP1B1P2-201ENST00000416196 106 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 AC018634.1-201ENST00000437554 401 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 OR1AB1P-201ENST00000585564 761 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 MIR3199-2-201ENST00000636243 86 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHD6Q8TD26 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 RPL7P54-201ENST00000438336 674 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 Z99127.3-201ENST00000448158 395 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.32□□□□□ -2.04
CHD6Q8TD26 MTND5P24-201ENST00000438892 1767 ntBASIC2.32□□□□□ -2.04
CHD6Q8TD26 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 AC107021.2-201ENST00000567714 2095 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHD6Q8TD26 Z82209.1-201ENST00000422141 2135 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 RNU6-457P-201ENST00000363999 107 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 GCNT6-201ENST00000379591 934 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 RNA5SP31-201ENST00000411144 127 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHD6Q8TD26 AK6P1-201ENST00000540219 478 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 OR1S1-201ENST00000624470 978 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 AC025125.1-201ENST00000624743 1922 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 AL359511.1-201ENST00000402970 211 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHD6Q8TD26 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 SAGE4P-201ENST00000442271 3381 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 RPL29P29-201ENST00000448725 423 ntBASIC2.31□□□□□ -2.04
CHD6Q8TD26 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD6Q8TD26 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHD6Q8TD26 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 AL031985.3-201ENST00000565390 2449 ntBASIC2.3□□□□□ -2.04
CHD6Q8TD26 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD6Q8TD26 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD6Q8TD26 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 RNU4-62P-201ENST00000410125 130 ntBASIC2.3□□□□□ -2.04
CHD6Q8TD26 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHD6Q8TD26 UBE2V1P5-201ENST00000440070 405 ntBASIC2.3□□□□□ -2.04
CHD6Q8TD26 RPL23AP76-201ENST00000441860 458 ntBASIC2.3□□□□□ -2.04
CHD6Q8TD26 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 AL078603.1-201ENST00000603824 313 ntBASIC2.3□□□□□ -2.04
CHD6Q8TD26 AL158196.1-201ENST00000616786 434 ntBASIC2.3□□□□□ -2.04
CHD6Q8TD26 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.3□□□□□ -2.04
CHD6Q8TD26 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHD6Q8TD26 Y_RNA.251-201ENST00000364551 99 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 AC092798.1-201ENST00000458542 409 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 SNORA31.1-201ENST00000515993 133 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 SNORA31.5-201ENST00000516190 133 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 AC005730.3-201ENST00000583067 366 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHD6Q8TD26 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 CDC27P2-201ENST00000425026 1922 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHD6Q8TD26 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 MIR4738-201ENST00000579134 87 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHD6Q8TD26 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.29□□□□□ -2.04
CHD6Q8TD26 DDX18P3-201ENST00000404856 2007 ntBASIC2.29□□□□□ -2.04
CHD6Q8TD26 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CHD6Q8TD26 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHD6Q8TD26 Y_RNA.191-201ENST00000363972 113 ntBASIC2.28□□□□□ -2.04
CHD6Q8TD26 YPEL5P1-201ENST00000419731 367 ntBASIC2.28□□□□□ -2.04
CHD6Q8TD26 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms