Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMARCD3Q6STE5 ASNSP3-201ENST00000451989 1306 ntBASIC2.67□□□□□ -1.98
SMARCD3Q6STE5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SMARCD3Q6STE5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 RPL9P7-201ENST00000330965 580 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 RNU6-1293P-201ENST00000384077 107 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 SNORA26.7-201ENST00000391288 122 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL512504.1-201ENST00000415494 778 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL158156.1-201ENST00000422509 473 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL451062.2-201ENST00000427515 271 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 RPL21P2-201ENST00000440049 481 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 RPL34P26-201ENST00000445636 354 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL162389.1-201ENST00000449233 177 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 HMGB1P15-201ENST00000453854 435 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AP002345.1-201ENST00000456493 928 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC117440.1-201ENST00000474107 571 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 OR52A4P-202ENST00000481634 799 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 FAM60DP-201ENST00000524174 632 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 SETP2-201ENST00000553886 926 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL049870.4-201ENST00000555741 486 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC005412.1-201ENST00000580812 1049 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 SNORD84-203ENST00000584275 78 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC069200.1-201ENST00000609511 323 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AL590282.1-201ENST00000610379 1136 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 MIR7112-201ENST00000616126 65 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC244100.1-202ENST00000621554 382 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 RNU6-156P-201ENST00000621869 107 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 AC009487.2-201ENST00000420969 6821 ntBASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SMARCD3Q6STE5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.65□□□□□ -1.98
SMARCD3Q6STE5 GABRG2-229ENST00000641017 3628 ntBASIC2.65□□□□□ -1.98
SMARCD3Q6STE5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 RNU1-35P-201ENST00000362782 153 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 MIR181A2-201ENST00000384863 110 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 RN7SKP220-201ENST00000410611 288 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 RPL7P8-201ENST00000411964 730 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC005517.2-201ENST00000424673 553 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL445528.1-201ENST00000426330 420 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL590623.1-201ENST00000427864 105 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL606490.7-201ENST00000433136 191 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL591503.2-201ENST00000442314 1005 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 ELOCP13-201ENST00000443934 329 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL024509.2-201ENST00000493462 493 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL358832.1-201ENST00000497800 389 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 RNU6-760P-201ENST00000516078 97 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC019227.1-201ENST00000526902 510 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC024220.1-201ENST00000603675 484 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AL354696.1-201ENST00000614652 497 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 LRRC77P-213ENST00000637727 880 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 MTND4P31-201ENST00000425607 1343 ntBASIC2.65□□□□□ -1.99
SMARCD3Q6STE5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 SNORA27.3-201ENST00000364937 134 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 SNORA54-201ENST00000384281 123 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 RNA5SP120-201ENST00000410900 112 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 RNU2-6P-201ENST00000411404 190 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 RPL7P10-201ENST00000417407 739 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 MTND4LP7-201ENST00000431728 294 ntBASIC2.64□□□□□ -1.99
SMARCD3Q6STE5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms