Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AL596244.1-201ENST00000567068 3779 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AL391987.6-201ENST00000305671 199 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 Y_RNA.151-201ENST00000363566 112 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 Y_RNA.793-201ENST00000411222 111 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AL139156.1-201ENST00000412785 841 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 RPS3AP46-201ENST00000448352 682 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 FABP5P13-201ENST00000452144 328 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 RNU6-1218P-201ENST00000458990 108 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 RNU7-138P-201ENST00000459479 64 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 HMGB1P21-201ENST00000502313 581 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 DEFB108D-201ENST00000527787 222 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AC100827.5-201ENST00000615883 426 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 SNHG22-203ENST00000617833 660 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AL137067.2-201ENST00000621202 131 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 AL589993.1-201ENST00000407450 2524 ntBASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.2□□□□□ -1.42
PTCRAQ6ISU1 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC009951.1-201ENST00000623674 2614 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 LCOR-201ENST00000286067 4542 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 Y_RNA.65-201ENST00000362846 100 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 RNY1P16-201ENST00000363063 111 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 RNA5SP350-201ENST00000363298 111 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 SMIM11P1-201ENST00000369586 178 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 MRPL35P1-201ENST00000404272 572 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 RPS12P17-201ENST00000438591 377 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 CEACAMP7-201ENST00000444105 496 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 RN7SL583P-201ENST00000475692 287 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC109329.1-201ENST00000518744 317 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC027229.1-201ENST00000583887 253 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC010620.2-201ENST00000600135 313 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC010900.2-201ENST00000604508 210 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC006023.2-201ENST00000609916 167 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 AC007998.5-201ENST00000622938 237 ntBASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PTCRAQ6ISU1 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PTCRAQ6ISU1 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCRAQ6ISU1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PTCRAQ6ISU1 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
PTCRAQ6ISU1 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms