Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RPL23AP24-201ENST00000458203 385 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC116533.1-201ENST00000459748 321 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC004801.2-202ENST00000463559 283 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC012181.1-201ENST00000479895 423 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC017037.2-201ENST00000513850 890 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 RNA5SP519-201ENST00000516480 119 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN1BQ07699 HIGD1AP10-201ENST00000527837 282 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN1BQ07699 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.55□□□□□ -1.84
SCN1BQ07699 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.55□□□□□ -1.84
SCN1BQ07699 MIR4715-201ENST00000584117 79 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN1BQ07699 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC091057.2-201ENST00000602594 792 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC104785.1-201ENST00000603220 588 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC004987.4-201ENST00000603383 338 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC092354.2-201ENST00000607786 514 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC006386.1-201ENST00000619436 415 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 MIR7703-201ENST00000620784 77 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AL445363.3-201ENST00000623080 671 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC008013.2-202ENST00000637965 364 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN1BQ07699 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 RNU1-14P-201ENST00000362759 152 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 Y_RNA.234-201ENST00000364409 97 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 PTMAP5-201ENST00000393073 333 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AL136372.1-201ENST00000403060 228 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 HSPE1P8-201ENST00000406997 288 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 RNU2-43P-201ENST00000410306 190 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 RPL37P18-201ENST00000411602 243 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AL592310.1-201ENST00000414330 671 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 SSR1P2-201ENST00000415208 787 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC009480.2-201ENST00000422916 432 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AL953862.1-201ENST00000423016 168 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 RPS29P17-201ENST00000430795 166 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 FGF7P5-201ENST00000441829 291 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC002381.1-201ENST00000447049 280 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 RPL31P50-201ENST00000471002 296 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.54□□□□□ -1.84
SCN1BQ07699 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 RNA5SP49-201ENST00000516450 115 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC105233.3-201ENST00000531125 744 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 OR6C7P-201ENST00000547875 934 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC137768.1-201ENST00000549998 553 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN1BQ07699 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AL109653.1-201ENST00000603091 248 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC006254.3-201ENST00000603353 884 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AC090246.1-201ENST00000616499 426 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AL357080.1-201ENST00000617394 239 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AL445264.1-201ENST00000621719 171 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 AP000776.1-201ENST00000530032 1663 ntBASIC3.54□□□□□ -1.84
SCN1BQ07699 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN1BQ07699 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN1BQ07699 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN1BQ07699 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN1BQ07699 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms