Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC046144.1-201ENST00000478559 1853 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS1Q01581 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AL079305.1-201ENST00000623159 3008 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS1Q01581 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 U6.112-201ENST00000384129 70 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 RNU6-207P-201ENST00000384137 107 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AL138880.1-201ENST00000405824 642 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 RNU6-77P-201ENST00000410554 91 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 RPF2P1-201ENST00000424137 906 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 NEK4P1-201ENST00000433383 879 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 HMGB3P6-201ENST00000444896 598 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS1Q01581 HMGN1P5-201ENST00000448591 263 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 HMGB3P8-201ENST00000449709 577 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 SLC31A1P1-201ENST00000451221 567 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC233982.1-201ENST00000451247 436 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 BX248409.1-201ENST00000455497 255 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 HMGN2P16-201ENST00000456802 261 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 NF1P3-201ENST00000457709 450 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC074250.1-201ENST00000511117 192 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 MTCO3P27-201ENST00000514397 196 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 PRELID3BP4-201ENST00000515476 571 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 RNU5A-7P-201ENST00000515979 116 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AP003355.1-201ENST00000518956 587 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 IGJP1-201ENST00000522682 475 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 UBE2NP1-201ENST00000545592 458 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC090079.2-201ENST00000575289 768 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 MTATP6P2-201ENST00000603319 678 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AC100793.4-201ENST00000613683 429 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 AP000720.1-201ENST00000625091 483 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 SNORA50A-202ENST00000629536 136 ntBASIC3.05□□□□□ -1.92
HMGCS1Q01581 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGCS1Q01581 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGCS1Q01581 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 RNA5SP267-201ENST00000364893 126 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 RNVU1-14-201ENST00000384770 164 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 RNU6-932P-201ENST00000391108 106 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 RNU6-272P-201ENST00000411028 104 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 VDAC1P3-201ENST00000434069 851 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 OR51B8P-201ENST00000449892 769 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 RNU7-140P-201ENST00000459546 60 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC091153.1-201ENST00000466297 402 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 PRDX3P4-201ENST00000470828 747 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 HSPD1P15-201ENST00000505573 1122 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 RNU6-202P-201ENST00000515998 96 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC004217.3-201ENST00000551552 878 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL845331.3-202ENST00000562856 261 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC037471.2-201ENST00000564941 598 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 VN1R88P-201ENST00000596787 292 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC133794.1-201ENST00000602731 914 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL020997.3-201ENST00000602843 359 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 SRGNP1-201ENST00000603392 451 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 U73479.1-201ENST00000618062 168 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AC253576.2-201ENST00000618815 580 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL109659.3-201ENST00000624985 950 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 AL590396.4-201ENST00000636779 956 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
HMGCS1Q01581 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HMGCS1Q01581 MAPK10-362ENST00000641864 4484 ntBASIC3.04□□□□□ -1.92
HMGCS1Q01581 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms