Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC078899.3-201ENST00000599065 212 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.25□□□□□ -2.05
ABCA4P78363 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.25□□□□□ -2.05
ABCA4P78363 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.25□□□□□ -2.05
ABCA4P78363 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ABCA4P78363 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCA4P78363 MAPK10-322ENST00000641485 4530 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ABCA4P78363 SNORD62.1-201ENST00000362541 86 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 RNU6-618P-201ENST00000363518 112 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
ABCA4P78363 AL513043.1-201ENST00000439124 535 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 RPL23AP31-201ENST00000456160 467 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AC133134.1-201ENST00000466800 359 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AC093663.2-201ENST00000484625 313 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AP001086.1-201ENST00000494882 321 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 MIR1273D-201ENST00000577266 86 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCA4P78363 AC123768.4-201ENST00000616244 701 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCA4P78363 MIR181A2-201ENST00000384863 110 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 SNORA81-201ENST00000408493 178 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCA4P78363 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCA4P78363 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCA4P78363 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA4P78363 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.24□□□□□ -2.05
ABCA4P78363 HMGB3P8-201ENST00000449709 577 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AC008280.2-201ENST00000455473 307 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
ABCA4P78363 RN7SL75P-201ENST00000461926 281 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AC103975.1-201ENST00000482506 483 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AC108860.1-201ENST00000484521 383 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 OR5H5P-201ENST00000503164 928 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AC100870.1-201ENST00000522035 505 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.24□□□□□ -2.05
ABCA4P78363 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCA4P78363 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.24□□□□□ -2.05
ABCA4P78363 AC083899.3-201ENST00000603413 594 ntBASIC2.24□□□□□ -2.05
ABCA4P78363 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ABCA4P78363 AC090229.1-201ENST00000590983 1609 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 AC087565.3-202ENST00000642085 1603 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.23□□□□□ -2.05
ABCA4P78363 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
ABCA4P78363 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
ABCA4P78363 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.23□□□□□ -2.05
ABCA4P78363 RNU6-253P-201ENST00000384730 105 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 MTCO3P31-201ENST00000405526 789 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.23□□□□□ -2.05
ABCA4P78363 RPL29P29-201ENST00000448725 423 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 SNORD108-201ENST00000459332 71 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 RPL21P41-201ENST00000459863 264 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 RPL23AP62-201ENST00000463396 453 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 RN7SL636P-201ENST00000497504 294 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 AC116337.1-201ENST00000509680 687 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.23□□□□□ -2.05
ABCA4P78363 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.23□□□□□ -2.05
ABCA4P78363 AC034236.3-201ENST00000605999 461 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 AL354950.1-201ENST00000614150 568 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.23□□□□□ -2.05
ABCA4P78363 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.23□□□□□ -2.05
ABCA4P78363 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.23□□□□□ -2.05
ABCA4P78363 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.23□□□□□ -2.05
ABCA4P78363 AC104454.1-201ENST00000421341 1401 ntBASIC2.23□□□□□ -2.05
ABCA4P78363 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.23□□□□□ -2.05
ABCA4P78363 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 USP9YP20-201ENST00000419224 558 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 AC009965.2-201ENST00000425328 970 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 AL390023.1-201ENST00000428836 262 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 AC011037.1-201ENST00000483964 558 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 IGKV2-36-201ENST00000519999 223 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC103810.6-201ENST00000606708 136 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA4P78363 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCA4P78363 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC105402.2-201ENST00000438503 358 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
ABCA4P78363 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA4P78363 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.22□□□□□ -2.05
ABCA4P78363 RPL21P99-201ENST00000480369 423 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 AP004217.1-201ENST00000480579 346 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 AC006445.2-201ENST00000510061 472 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 RNA5SP320-201ENST00000516263 124 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ABCA4P78363 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.22□□□□□ -2.05
ABCA4P78363 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC103710.3-201ENST00000608157 948 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ABCA4P78363 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ABCA4P78363 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
ABCA4P78363 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
ABCA4P78363 GABRG2-229ENST00000641017 3628 ntBASIC2.22□□□□□ -2.05
ABCA4P78363 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
ABCA4P78363 RPL21P132-201ENST00000331267 462 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms