Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 RNA5SP191-201ENST00000362585 102 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RNU6-97P-201ENST00000363387 104 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RNA5SP28-201ENST00000363841 119 ntBASIC3.97□□□□□ -1.77
SOX2P48431 Y_RNA.234-201ENST00000364409 97 ntBASIC3.97□□□□□ -1.77
SOX2P48431 Y_RNA.248-201ENST00000364501 109 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RNA5SP22-201ENST00000365393 109 ntBASIC3.97□□□□□ -1.77
SOX2P48431 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 RNU6-1279P-201ENST00000383917 103 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RNU6-1207P-201ENST00000384343 107 ntBASIC3.97□□□□□ -1.77
SOX2P48431 MIR708-201ENST00000390708 88 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC092642.1-201ENST00000392417 425 ntBASIC3.97□□□□□ -1.77
SOX2P48431 Z98745.1-201ENST00000402553 494 ntBASIC3.97□□□□□ -1.77
SOX2P48431 MRPL42P2-201ENST00000403169 426 ntBASIC3.97□□□□□ -1.77
SOX2P48431 BTF3P7-201ENST00000407097 488 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RNU2-8P-201ENST00000410727 190 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RN7SKP216-201ENST00000411050 312 ntBASIC3.97□□□□□ -1.77
SOX2P48431 CYCSP10-201ENST00000417973 294 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 AL353777.1-201ENST00000425552 326 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AL589872.1-201ENST00000426602 288 ntBASIC3.97□□□□□ -1.77
SOX2P48431 ISCA1P6-201ENST00000427740 390 ntBASIC3.97□□□□□ -1.77
SOX2P48431 PSMA2P3-201ENST00000429685 675 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.97□□□□□ -1.77
SOX2P48431 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.97□□□□□ -1.77
SOX2P48431 AC073850.1-201ENST00000449243 255 ntBASIC3.97□□□□□ -1.77
SOX2P48431 PPIAP20-201ENST00000449839 135 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 AC016724.1-201ENST00000453215 421 ntBASIC3.97□□□□□ -1.77
SOX2P48431 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 RPL7P15-201ENST00000461190 712 ntBASIC3.97□□□□□ -1.77
SOX2P48431 RPS7P7-201ENST00000463499 571 ntBASIC3.97□□□□□ -1.77
SOX2P48431 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SOX2P48431 RPS4XP14-201ENST00000493072 781 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC008953.1-201ENST00000497334 318 ntBASIC3.97□□□□□ -1.77
SOX2P48431 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 AC005798.1-201ENST00000513715 387 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.97□□□□□ -1.77
SOX2P48431 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.97□□□□□ -1.77
SOX2P48431 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.97□□□□□ -1.77
SOX2P48431 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.97□□□□□ -1.77
SOX2P48431 AC234778.2-201ENST00000566241 354 ntBASIC3.97□□□□□ -1.77
SOX2P48431 MIR4489-201ENST00000578869 62 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.97□□□□□ -1.77
SOX2P48431 AC067852.4-201ENST00000590314 478 ntBASIC3.97□□□□□ -1.77
SOX2P48431 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 AP002360.3-201ENST00000607673 710 ntBASIC3.97□□□□□ -1.77
SOX2P48431 BX323046.1-201ENST00000610145 535 ntBASIC3.97□□□□□ -1.77
SOX2P48431 MIR6768-201ENST00000610734 72 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AL121612.2-201ENST00000612261 482 ntBASIC3.97□□□□□ -1.77
SOX2P48431 AC009159.1-201ENST00000618386 642 ntBASIC3.97□□□□□ -1.77
SOX2P48431 MIR7154-201ENST00000620673 73 ntBASIC3.97□□□□□ -1.77
SOX2P48431 MIR6715B-201ENST00000637172 77 ntBASIC3.97□□□□□ -1.77
SOX2P48431 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.97□□□□□ -1.77
SOX2P48431 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SOX2P48431 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SOX2P48431 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
SOX2P48431 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.96□□□□□ -1.77
SOX2P48431 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
SOX2P48431 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
SOX2P48431 ELF2P3-201ENST00000445099 1506 ntBASIC3.96□□□□□ -1.78
SOX2P48431 IQCB2P-201ENST00000401788 1633 ntBASIC3.96□□□□□ -1.78
SOX2P48431 MAPK10-263ENST00000641052 4307 ntBASIC3.96□□□□□ -1.78
SOX2P48431 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SOX2P48431 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
SOX2P48431 AC139769.1-204ENST00000472297 1931 ntBASIC3.96□□□□□ -1.78
SOX2P48431 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 RNA5SP123-201ENST00000363244 119 ntBASIC3.96□□□□□ -1.78
SOX2P48431 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SOX2P48431 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.96□□□□□ -1.78
SOX2P48431 RN7SKP267-201ENST00000410381 285 ntBASIC3.96□□□□□ -1.78
SOX2P48431 RNU6-195P-201ENST00000411352 109 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AC140479.3-201ENST00000418944 1126 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 PIGFP2-201ENST00000421400 651 ntBASIC3.96□□□□□ -1.78
SOX2P48431 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.96□□□□□ -1.78
SOX2P48431 USP9YP36-201ENST00000424581 829 ntBASIC3.96□□□□□ -1.78
SOX2P48431 USP9YP18-201ENST00000425912 695 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.96□□□□□ -1.78
SOX2P48431 AL358934.1-201ENST00000432346 324 ntBASIC3.96□□□□□ -1.78
SOX2P48431 CBX1P1-201ENST00000440184 427 ntBASIC3.96□□□□□ -1.78
SOX2P48431 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms