Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC021678.1-201ENST00000505195 936 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 AC110760.3-202ENST00000515177 371 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 Vault.1-201ENST00000516474 102 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.34□□□□□ -1.71
TM4SF1P30408 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.34□□□□□ -1.71
TM4SF1P30408 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF1P30408 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.34□□□□□ -1.71
TM4SF1P30408 AC090695.1-201ENST00000561269 1222 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TM4SF1P30408 SNORD39.3-201ENST00000584451 71 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.34□□□□□ -1.71
TM4SF1P30408 MIR4760-201ENST00000585040 80 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 OR4G1P-201ENST00000588632 938 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.34□□□□□ -1.71
TM4SF1P30408 OR6C71P-202ENST00000641886 1107 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 ZNF807-201ENST00000328088 1707 ntBASIC4.34□□□□□ -1.71
TM4SF1P30408 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
TM4SF1P30408 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.34□□□□□ -1.71
TM4SF1P30408 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TM4SF1P30408 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.33□□□□□ -1.72
TM4SF1P30408 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.33□□□□□ -1.72
TM4SF1P30408 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.33□□□□□ -1.72
TM4SF1P30408 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.33□□□□□ -1.72
TM4SF1P30408 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 ZNF734P-201ENST00000419494 1534 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 CDR1-202ENST00000625883 1485 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TM4SF1P30408 RNU5D-1-201ENST00000363299 116 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 U3.39-201ENST00000408569 239 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 RNU2-42P-201ENST00000410697 113 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AL356320.2-201ENST00000417263 507 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.33□□□□□ -1.72
TM4SF1P30408 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.33□□□□□ -1.72
TM4SF1P30408 AC006028.1-201ENST00000438379 402 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AL590399.6-201ENST00000446396 307 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC004022.1-201ENST00000447766 1066 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 RSL24D1P3-201ENST00000449255 495 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.33□□□□□ -1.72
TM4SF1P30408 RFC5P1-201ENST00000454419 874 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 SNORD11.1-201ENST00000459482 85 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC023598.1-201ENST00000472521 361 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 RPS3AP43-201ENST00000479743 781 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.33□□□□□ -1.72
TM4SF1P30408 AC109458.1-201ENST00000508858 316 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.33□□□□□ -1.72
TM4SF1P30408 RNA5SP341-201ENST00000516261 117 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.33□□□□□ -1.72
TM4SF1P30408 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.33□□□□□ -1.72
TM4SF1P30408 AC138915.2-201ENST00000569776 97 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC015688.2-201ENST00000584523 262 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC067852.3-201ENST00000589177 561 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 BNIP3P26-201ENST00000600827 554 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AP003392.5-201ENST00000607857 415 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC231759.1-201ENST00000616455 597 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AL158163.2-201ENST00000619110 700 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AL078595.3-201ENST00000623815 1166 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC026422.1-201ENST00000623961 452 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC006386.2-201ENST00000624491 75 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC012005.1-201ENST00000624575 75 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 AC127502.3-201ENST00000636170 1206 ntBASIC4.33□□□□□ -1.72
TM4SF1P30408 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TM4SF1P30408 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TM4SF1P30408 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TM4SF1P30408 MTND5P3-201ENST00000438536 1800 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.32□□□□□ -1.72
TM4SF1P30408 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF1P30408 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF1P30408 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF1P30408 RNU6-560P-201ENST00000364007 108 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 RNA5SP42-201ENST00000364278 115 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 RNVU1-3-201ENST00000364313 161 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 Y_RNA.465-201ENST00000384293 102 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 MIR506-201ENST00000384998 124 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 EIF5P1-201ENST00000400019 1231 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AL355379.1-201ENST00000405542 640 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AL590084.1-201ENST00000407885 387 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 MTCYBP24-201ENST00000420387 1106 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 USP12PY-201ENST00000427677 1064 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF1P30408 PTENP1-201ENST00000447117 1215 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF1P30408 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.32□□□□□ -1.72
TM4SF1P30408 SNORD108-201ENST00000459332 71 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 S100A11P1-201ENST00000477525 312 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF1P30408 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.32□□□□□ -1.72
TM4SF1P30408 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF1P30408 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF1P30408 FCF1P8-201ENST00000510322 597 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 HIGD1AP3-201ENST00000515857 278 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 RN7SKP209-201ENST00000516888 304 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 RNU6-1261P-201ENST00000517194 104 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms