Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AP001029.3-201ENST00000588063 596 ntBASIC4.54□□□□□ -1.68
CD40P25942 AC108738.1-201ENST00000603703 237 ntBASIC4.54□□□□□ -1.68
CD40P25942 IGHV3-29-201ENST00000604817 344 ntBASIC4.54□□□□□ -1.68
CD40P25942 RNA5SP439-201ENST00000617595 124 ntBASIC4.54□□□□□ -1.68
CD40P25942 AL603758.1-201ENST00000618654 241 ntBASIC4.54□□□□□ -1.68
CD40P25942 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 AC093648.1-201ENST00000623546 606 ntBASIC4.54□□□□□ -1.68
CD40P25942 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CD40P25942 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 SCARNA15-201ENST00000607520 4325 ntBASIC4.54□□□□□ -1.68
CD40P25942 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD40P25942 AC112198.2-201ENST00000426589 6996 ntBASIC4.54□□□□□ -1.68
CD40P25942 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.54□□□□□ -1.68
CD40P25942 AC090229.1-201ENST00000590983 1609 ntBASIC4.54□□□□□ -1.68
CD40P25942 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CD40P25942 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 RIOK3P1-201ENST00000418778 1528 ntBASIC4.53□□□□□ -1.68
CD40P25942 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 SNORA62.1-201ENST00000364287 154 ntBASIC4.53□□□□□ -1.68
CD40P25942 RN7SKP153-201ENST00000365026 316 ntBASIC4.53□□□□□ -1.68
CD40P25942 MIR135A2-201ENST00000384854 100 ntBASIC4.53□□□□□ -1.68
CD40P25942 MIR454-201ENST00000390180 115 ntBASIC4.53□□□□□ -1.68
CD40P25942 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CD40P25942 HSPD1P16-201ENST00000402302 394 ntBASIC4.53□□□□□ -1.68
CD40P25942 AL136116.1-201ENST00000403591 381 ntBASIC4.53□□□□□ -1.68
CD40P25942 RNU4-65P-201ENST00000410473 140 ntBASIC4.53□□□□□ -1.68
CD40P25942 RNU2-39P-201ENST00000410604 198 ntBASIC4.53□□□□□ -1.68
CD40P25942 RPL12P9-201ENST00000412942 488 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC093162.1-201ENST00000419682 124 ntBASIC4.53□□□□□ -1.68
CD40P25942 MTND4P28-201ENST00000426217 387 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC016712.1-201ENST00000431088 378 ntBASIC4.53□□□□□ -1.68
CD40P25942 AL161722.2-201ENST00000434731 981 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC099670.2-201ENST00000435130 321 ntBASIC4.53□□□□□ -1.68
CD40P25942 UBE2V1P7-201ENST00000446395 340 ntBASIC4.53□□□□□ -1.68
CD40P25942 RPL7L1P1-201ENST00000448259 785 ntBASIC4.53□□□□□ -1.68
CD40P25942 PPIAP3-201ENST00000450588 505 ntBASIC4.53□□□□□ -1.68
CD40P25942 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.53□□□□□ -1.68
CD40P25942 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.53□□□□□ -1.68
CD40P25942 RPS29P15-201ENST00000458329 171 ntBASIC4.53□□□□□ -1.68
CD40P25942 AP000797.2-201ENST00000475768 606 ntBASIC4.53□□□□□ -1.68
CD40P25942 RN7SL826P-201ENST00000479724 288 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 AL163973.1-201ENST00000484753 577 ntBASIC4.53□□□□□ -1.68
CD40P25942 RPL7P23-201ENST00000493874 747 ntBASIC4.53□□□□□ -1.68
CD40P25942 NIPA2P2-201ENST00000496376 1083 ntBASIC4.53□□□□□ -1.68
CD40P25942 EIF4EP3-201ENST00000498782 656 ntBASIC4.53□□□□□ -1.68
CD40P25942 IGBP1P4-201ENST00000503202 879 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 SNORD60.2-201ENST00000516883 86 ntBASIC4.53□□□□□ -1.68
CD40P25942 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 OR5B19P-201ENST00000531766 928 ntBASIC4.53□□□□□ -1.68
CD40P25942 OR5BN1P-201ENST00000532955 829 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 AC123904.3-201ENST00000547218 814 ntBASIC4.53□□□□□ -1.68
CD40P25942 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.53□□□□□ -1.68
CD40P25942 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 AC068831.4-201ENST00000556118 109 ntBASIC4.53□□□□□ -1.68
CD40P25942 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.53□□□□□ -1.68
CD40P25942 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.53□□□□□ -1.68
CD40P25942 AC010525.2-201ENST00000590920 195 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC010591.1-201ENST00000603941 649 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC118658.2-201ENST00000618697 459 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC010338.1-201ENST00000621823 717 ntBASIC4.53□□□□□ -1.68
CD40P25942 AC006065.5-201ENST00000623427 349 ntBASIC4.53□□□□□ -1.68
CD40P25942 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD40P25942 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.53□□□□□ -1.68
CD40P25942 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CD40P25942 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD40P25942 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CD40P25942 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CD40P25942 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.52□□□□□ -1.69
CD40P25942 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD40P25942 MUC2-202ENST00000613187 4845 ntBASIC4.52□□□□□ -1.69
CD40P25942 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD40P25942 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD40P25942 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CD40P25942 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms