Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL356981.1-201ENST00000454879 684 ntBASIC7.46□□□□□ -1.22
CD44P16070 RPL23AP64-201ENST00000469465 435 ntBASIC7.46□□□□□ -1.22
CD44P16070 RNU6-191P-201ENST00000516295 94 ntBASIC7.46□□□□□ -1.22
CD44P16070 RNU6-567P-201ENST00000516746 107 ntBASIC7.46□□□□□ -1.22
CD44P16070 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC7.46□□□□□ -1.22
CD44P16070 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC7.46□□□□□ -1.22
CD44P16070 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.46□□□□□ -1.22
CD44P16070 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CD44P16070 MIR15A-201ENST00000607334 83 ntBASIC7.46□□□□□ -1.22
CD44P16070 AL445647.2-201ENST00000615170 130 ntBASIC7.46□□□□□ -1.22
CD44P16070 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.46□□□□□ -1.22
CD44P16070 AL353748.2-201ENST00000622148 471 ntBASIC7.46□□□□□ -1.22
CD44P16070 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 AL137058.3-201ENST00000624531 3099 ntBASIC7.46□□□□□ -1.22
CD44P16070 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
CD44P16070 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC7.46□□□□□ -1.22
CD44P16070 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CD44P16070 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CD44P16070 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.45□□□□□ -1.22
CD44P16070 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 CCDC162P-202ENST00000368966 6751 ntBASIC7.45□□□□□ -1.22
CD44P16070 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 AL662791.3-201ENST00000413771 776 ntBASIC7.45□□□□□ -1.22
CD44P16070 AC019185.3-201ENST00000438805 323 ntBASIC7.45□□□□□ -1.22
CD44P16070 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 RN7SL456P-201ENST00000469290 295 ntBASIC7.45□□□□□ -1.22
CD44P16070 SNORA58-201ENST00000505219 137 ntBASIC7.45□□□□□ -1.22
CD44P16070 HMGN1P11-201ENST00000508668 303 ntBASIC7.45□□□□□ -1.22
CD44P16070 RN7SKP12-201ENST00000516275 143 ntBASIC7.45□□□□□ -1.22
CD44P16070 IGLC4-201ENST00000517690 248 ntBASIC7.45□□□□□ -1.22
CD44P16070 IGKV2D-38-201ENST00000518423 240 ntBASIC7.45□□□□□ -1.22
CD44P16070 WBP1LP3-201ENST00000523033 208 ntBASIC7.45□□□□□ -1.22
CD44P16070 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.45□□□□□ -1.22
CD44P16070 RN7SL199P-201ENST00000578752 281 ntBASIC7.45□□□□□ -1.22
CD44P16070 RN7SL656P-201ENST00000579044 281 ntBASIC7.45□□□□□ -1.22
CD44P16070 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.45□□□□□ -1.22
CD44P16070 RN7SL404P-201ENST00000582421 281 ntBASIC7.45□□□□□ -1.22
CD44P16070 MIR5682-201ENST00000584864 76 ntBASIC7.45□□□□□ -1.22
CD44P16070 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.45□□□□□ -1.22
CD44P16070 AC068831.7-201ENST00000616954 363 ntBASIC7.45□□□□□ -1.22
CD44P16070 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CD44P16070 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CD44P16070 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 AC025809.2-201ENST00000625085 1802 ntBASIC7.45□□□□□ -1.22
CD44P16070 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CD44P16070 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.45□□□□□ -1.22
CD44P16070 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CD44P16070 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.44□□□□□ -1.22
CD44P16070 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CD44P16070 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 Y_RNA.219-201ENST00000364232 113 ntBASIC7.44□□□□□ -1.22
CD44P16070 RNU6-915P-201ENST00000364943 103 ntBASIC7.44□□□□□ -1.22
CD44P16070 RNA5SP176-201ENST00000390956 110 ntBASIC7.44□□□□□ -1.22
CD44P16070 AL353621.1-201ENST00000418219 243 ntBASIC7.44□□□□□ -1.22
CD44P16070 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CD44P16070 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC7.44□□□□□ -1.22
CD44P16070 AL121594.1-201ENST00000475906 575 ntBASIC7.44□□□□□ -1.22
CD44P16070 RN7SKP164-201ENST00000516138 266 ntBASIC7.44□□□□□ -1.22
CD44P16070 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC7.44□□□□□ -1.22
CD44P16070 AC100767.1-201ENST00000528178 123 ntBASIC7.44□□□□□ -1.22
CD44P16070 AC011921.2-201ENST00000589465 152 ntBASIC7.44□□□□□ -1.22
CD44P16070 AL590032.1-201ENST00000604920 252 ntBASIC7.44□□□□□ -1.22
CD44P16070 TUG1_2.1-201ENST00000614234 87 ntBASIC7.44□□□□□ -1.22
CD44P16070 AC106782.7-201ENST00000624024 418 ntBASIC7.44□□□□□ -1.22
CD44P16070 AC133555.5-201ENST00000624430 418 ntBASIC7.44□□□□□ -1.22
CD44P16070 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.44□□□□□ -1.22
CD44P16070 UGP2-230ENST00000626380 276 ntTSL 5 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms