Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 OR4G2P-202ENST00000641004 1759 ntBASIC3.7□□□□□ -1.82
POLR1AO95602 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
POLR1AO95602 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
POLR1AO95602 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
POLR1AO95602 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
POLR1AO95602 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
POLR1AO95602 RPS20P25-201ENST00000412447 352 ntBASIC3.69□□□□□ -1.82
POLR1AO95602 AC108860.1-201ENST00000484521 383 ntBASIC3.69□□□□□ -1.82
POLR1AO95602 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.69□□□□□ -1.82
POLR1AO95602 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.69□□□□□ -1.82
POLR1AO95602 CBX3P5-201ENST00000552017 521 ntBASIC3.69□□□□□ -1.82
POLR1AO95602 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.69□□□□□ -1.82
POLR1AO95602 Z99129.2-201ENST00000619967 314 ntBASIC3.69□□□□□ -1.82
POLR1AO95602 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.69□□□□□ -1.82
POLR1AO95602 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.69□□□□□ -1.82
POLR1AO95602 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
POLR1AO95602 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.68□□□□□ -1.82
POLR1AO95602 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
POLR1AO95602 AC096638.1-201ENST00000444678 216 ntBASIC3.68□□□□□ -1.82
POLR1AO95602 HMGN1P5-201ENST00000448591 263 ntBASIC3.68□□□□□ -1.82
POLR1AO95602 AC016687.1-201ENST00000482574 353 ntBASIC3.68□□□□□ -1.82
POLR1AO95602 CKS1BP2-201ENST00000497342 240 ntBASIC3.68□□□□□ -1.82
POLR1AO95602 RNU6-548P-201ENST00000517083 115 ntBASIC3.68□□□□□ -1.82
POLR1AO95602 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
POLR1AO95602 OR7K1P-201ENST00000546439 926 ntBASIC3.68□□□□□ -1.82
POLR1AO95602 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
POLR1AO95602 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
POLR1AO95602 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.68□□□□□ -1.82
POLR1AO95602 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
POLR1AO95602 AL359511.1-201ENST00000402970 211 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 AC080125.1-201ENST00000414888 684 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 RPS20P5-201ENST00000434808 360 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 RANP3-201ENST00000530970 276 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.67□□□□□ -1.82
POLR1AO95602 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.67□□□□□ -1.82
POLR1AO95602 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.67□□□□□ -1.82
POLR1AO95602 MIR4506-201ENST00000584693 77 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
POLR1AO95602 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
POLR1AO95602 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR1AO95602 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR1AO95602 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR1AO95602 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
POLR1AO95602 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR1AO95602 OR4G11P-201ENST00000492842 939 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.67□□□□□ -1.82
POLR1AO95602 OR4A45P-201ENST00000529954 901 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
POLR1AO95602 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.67□□□□□ -1.82
POLR1AO95602 HPRT1P3-201ENST00000539521 576 ntBASIC3.67□□□□□ -1.82
POLR1AO95602 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
POLR1AO95602 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1AO95602 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1AO95602 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1AO95602 RPLP0P7-201ENST00000416050 667 ntBASIC3.66□□□□□ -1.82
POLR1AO95602 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1AO95602 MTCYBP19-201ENST00000517463 1124 ntBASIC3.66□□□□□ -1.82
POLR1AO95602 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
POLR1AO95602 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1AO95602 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1AO95602 AC022884.3-201ENST00000579571 248 ntBASIC3.66□□□□□ -1.82
POLR1AO95602 AC006116.7-201ENST00000590141 756 ntBASIC3.66□□□□□ -1.82
POLR1AO95602 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1AO95602 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
POLR1AO95602 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
POLR1AO95602 OR4G1P-202ENST00000641173 1788 ntBASIC3.65□□□□□ -1.82
POLR1AO95602 RNU6-253P-201ENST00000384730 105 ntBASIC3.65□□□□□ -1.82
POLR1AO95602 OR8L1P-201ENST00000534005 955 ntBASIC3.65□□□□□ -1.82
POLR1AO95602 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.65□□□□□ -1.82
POLR1AO95602 MIR5092-201ENST00000583139 88 ntBASIC3.65□□□□□ -1.82
POLR1AO95602 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.65□□□□□ -1.82
POLR1AO95602 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR1AO95602 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR1AO95602 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR1AO95602 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
POLR1AO95602 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
POLR1AO95602 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 MUPP-201ENST00000438111 566 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1AO95602 RN7SL499P-201ENST00000481141 276 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1AO95602 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1AO95602 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1AO95602 AC092326.2-201ENST00000624772 1561 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 AC012078.1-201ENST00000405035 1646 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1AO95602 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
POLR1AO95602 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1AO95602 RPL9P7-201ENST00000330965 580 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.64□□□□□ -1.83
POLR1AO95602 AL606490.7-201ENST00000433136 191 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 AC103975.1-201ENST00000482506 483 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 RPS27P27-201ENST00000498779 255 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 AC108471.1-201ENST00000513977 287 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms