Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MTSS1O43312 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
MTSS1O43312 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
MTSS1O43312 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MTSS1O43312 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MTSS1O43312 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
MTSS1O43312 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.85□□□□□ -1.63
MTSS1O43312 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MTSS1O43312 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MTSS1O43312 XPOTP1-201ENST00000443317 2398 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MTSS1O43312 CASC19-280ENST00000642102 1351 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 GNG5P1-201ENST00000255500 204 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 RPL32P3-201ENST00000359025 275 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 RNY4P14-201ENST00000363656 96 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 RNU6-441P-201ENST00000384545 106 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MTSS1O43312 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MTSS1O43312 HMGB1P17-201ENST00000403495 628 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 AL023807.1-201ENST00000407932 359 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.84□□□□□ -1.63
MTSS1O43312 AL138785.1-201ENST00000425821 331 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.84□□□□□ -1.63
MTSS1O43312 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.84□□□□□ -1.63
MTSS1O43312 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.84□□□□□ -1.63
MTSS1O43312 AC009961.2-201ENST00000435771 251 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 RSU1P2-202ENST00000437884 485 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.84□□□□□ -1.63
MTSS1O43312 MTCO3P18-201ENST00000440206 761 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MTSS1O43312 H2AFZP5-201ENST00000446960 382 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.84□□□□□ -1.63
MTSS1O43312 RPL30P11-201ENST00000495304 339 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 HMGB1P29-201ENST00000505659 499 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 SAP18P1-201ENST00000512058 390 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.84□□□□□ -1.63
MTSS1O43312 AC104986.1-201ENST00000517978 436 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.84□□□□□ -1.63
MTSS1O43312 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.84□□□□□ -1.63
MTSS1O43312 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.84□□□□□ -1.63
MTSS1O43312 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MTSS1O43312 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.84□□□□□ -1.63
MTSS1O43312 HMGB1P33-201ENST00000563485 527 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.84□□□□□ -1.63
MTSS1O43312 AC011477.5-201ENST00000586571 259 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.84□□□□□ -1.63
MTSS1O43312 AC083809.1-201ENST00000615051 472 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MTSS1O43312 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.84□□□□□ -1.63
MTSS1O43312 AC009268.2-201ENST00000621925 457 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 DUXAP9-208ENST00000622815 614 ntBASIC4.84□□□□□ -1.63
MTSS1O43312 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MTSS1O43312 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
MTSS1O43312 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
MTSS1O43312 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
MTSS1O43312 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.84□□□□□ -1.64
MTSS1O43312 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.84□□□□□ -1.64
MTSS1O43312 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
MTSS1O43312 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
MTSS1O43312 AL442639.1-201ENST00000625030 1899 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.83□□□□□ -1.64
MTSS1O43312 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 AC027290.2-201ENST00000623210 18662 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
MTSS1O43312 AL354685.2-201ENST00000448218 1447 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MTSS1O43312 RPL23AP57-201ENST00000332361 466 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MTSS1O43312 U8.3-201ENST00000363321 132 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 Y_RNA.295-201ENST00000364918 102 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 Y_RNA.573-201ENST00000384763 105 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 MIR649-201ENST00000384843 97 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 RN7SKP285-201ENST00000410137 318 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 RN7SKP267-201ENST00000410381 285 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 MTCO1P17-201ENST00000411522 491 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AL591848.1-201ENST00000413092 322 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AC138393.2-201ENST00000414742 246 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.83□□□□□ -1.64
MTSS1O43312 RPL30P3-201ENST00000424262 333 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 TIMM9P3-201ENST00000428659 274 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.83□□□□□ -1.64
MTSS1O43312 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.83□□□□□ -1.64
MTSS1O43312 AC079448.1-201ENST00000449377 373 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.83□□□□□ -1.64
MTSS1O43312 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.83□□□□□ -1.64
MTSS1O43312 AC013356.1-201ENST00000489027 564 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AC008628.2-201ENST00000502605 298 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.83□□□□□ -1.64
MTSS1O43312 AC006390.1-201ENST00000508068 283 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AC025465.4-201ENST00000513422 638 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 RNU2-46P-201ENST00000517038 113 ntBASIC4.83□□□□□ -1.64
MTSS1O43312 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.83□□□□□ -1.64
MTSS1O43312 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms