Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 AC243772.1-201ENST00000451620 410 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 AL353752.1-201ENST00000454946 260 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 SETP20-201ENST00000457046 852 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 RN7SL836P-201ENST00000476140 296 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 RPS27P20-201ENST00000492051 246 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 IGLVIV-53-201ENST00000520107 367 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 RNU4ATAC-201ENST00000580972 127 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 IGHV3-29-201ENST00000604817 344 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 SOCS5P3-201ENST00000425115 1576 ntBASIC5.71□□□□□ -1.5
GPC6Q9Y625 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC6Q9Y625 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC6Q9Y625 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 SNORD1C-201ENST00000363315 78 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNA5SP346-201ENST00000363541 121 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RN7SKP250-201ENST00000363924 321 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RN7SKP69-201ENST00000365390 305 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RN7SKP292-201ENST00000365522 317 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNU6-946P-201ENST00000383878 107 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNU6-393P-201ENST00000384475 107 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNU6-95P-201ENST00000384697 107 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNU11-4P-201ENST00000391149 133 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL157702.1-201ENST00000398764 426 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL139039.1-201ENST00000401900 692 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RPS4XP7-201ENST00000406274 780 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC069213.2-201ENST00000420238 366 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC013403.1-201ENST00000436954 263 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 MED28P3-201ENST00000444288 531 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC097359.1-201ENST00000447946 463 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC005008.1-201ENST00000456151 612 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC098818.1-201ENST00000478593 252 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RN7SL432P-201ENST00000484057 298 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RN7SL568P-201ENST00000493069 298 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 FTH1P24-201ENST00000503502 462 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 HMGN1P16-201ENST00000508308 283 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNU6-27P-201ENST00000516146 107 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 RNA5SP206-201ENST00000516703 121 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 Y_RNA.710-201ENST00000516975 110 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC105031.1-201ENST00000518550 476 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AP000889.1-201ENST00000530968 660 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL121576.1-201ENST00000556055 276 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL049779.3-201ENST00000557141 606 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC016727.2-201ENST00000603988 621 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AL355297.3-201ENST00000604082 446 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 AC145423.1-201ENST00000605712 336 ntBASIC5.7□□□□□ -1.5
GPC6Q9Y625 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
GPC6Q9Y625 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
GPC6Q9Y625 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.69□□□□□ -1.5
GPC6Q9Y625 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.69□□□□□ -1.5
GPC6Q9Y625 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GPC6Q9Y625 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC6Q9Y625 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC6Q9Y625 MTND5P27-201ENST00000428871 1720 ntBASIC5.69□□□□□ -1.5
GPC6Q9Y625 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC6Q9Y625 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GPC6Q9Y625 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GPC6Q9Y625 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
GPC6Q9Y625 Y_RNA.461-201ENST00000384263 103 ntBASIC5.69□□□□□ -1.5
GPC6Q9Y625 RNA5SP198-201ENST00000410376 127 ntBASIC5.69□□□□□ -1.5
GPC6Q9Y625 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms