Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 snoU13.8-201ENST00000458890 104 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-506P-201ENST00000516553 94 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-1178P-201ENST00000516674 107 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-714P-201ENST00000516963 103 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MTCO2P4-201ENST00000517968 247 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 OR5BC1P-201ENST00000529327 739 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL110118.1-201ENST00000553543 400 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL133241.1-201ENST00000556832 487 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC234778.2-201ENST00000566241 354 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 NRBF2P1-201ENST00000587407 859 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 RPL12P25-202ENST00000598100 674 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 YWHAQP7-201ENST00000603536 658 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC011468.4-201ENST00000603942 409 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AL596245.1-201ENST00000618994 362 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC068724.3-201ENST00000625906 87 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC104118.1-201ENST00000607625 1589 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 MAPK10-304ENST00000641341 3984 ntBASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDHB1Q9Y5F3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AP001642.1-201ENST00000624727 2117 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC091046.3-201ENST00000631455 1574 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RN7SKP227-201ENST00000364445 330 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-1283P-201ENST00000365314 105 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 MIR129-1-201ENST00000384972 72 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RNU1-82P-201ENST00000390851 165 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 MIR1250-201ENST00000408098 113 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RNU4-25P-201ENST00000410569 230 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 SPA17P1-201ENST00000416656 452 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RPEP2-201ENST00000432149 701 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AL353572.1-201ENST00000442490 417 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 H2AFZP5-201ENST00000446960 382 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 NANOGNBP1-201ENST00000448444 480 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RPL7P52-201ENST00000449200 742 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC093392.2-201ENST00000450682 337 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC079168.2-201ENST00000453977 416 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AP1S2P1-201ENST00000457344 379 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC108751.2-201ENST00000469993 231 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RPS3AP17-201ENST00000472594 777 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RN7SKP21-201ENST00000516503 220 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-201P-201ENST00000517100 61 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 EEF1B2P4-201ENST00000551398 348 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC067852.4-201ENST00000590314 478 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 VN1R79P-201ENST00000593540 513 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC008782.1-201ENST00000603386 430 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AL356218.2-201ENST00000605264 187 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 RNU6-87P-201ENST00000607561 108 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC138649.3-201ENST00000622154 254 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 PISRT1-201ENST00000626175 531 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC099654.13-201ENST00000639774 207 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC095050.2-201ENST00000510748 1458 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 AC108751.5-201ENST00000492880 1336 ntBASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHB1Q9Y5F3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHB1Q9Y5F3 SALL4P2-201ENST00000423288 2910 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms