Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AL121603.1-201ENST00000553815 142 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AC055876.1-202ENST00000567053 138 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AC005951.1-201ENST00000576706 485 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AL133393.1-201ENST00000603277 287 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AC128687.1-201ENST00000605304 619 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 AL034408.1-202ENST00000636088 415 ntBASIC3.09□□□□□ -1.91
CCNB1IP1Q9NPC3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CCNB1IP1Q9NPC3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.09□□□□□ -1.92
CCNB1IP1Q9NPC3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCNB1IP1Q9NPC3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RNA5SP124-201ENST00000362739 110 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU1-85P-201ENST00000364127 164 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AL591034.1-201ENST00000407447 340 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RN7SKP58-201ENST00000411010 305 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 Z99755.1-201ENST00000414048 380 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC008173.1-201ENST00000418901 264 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RPL17P49-201ENST00000443728 411 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC073387.1-201ENST00000453261 709 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RN7SL542P-201ENST00000467147 294 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 HMGB1P25-201ENST00000468402 607 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RPL7P5-201ENST00000471472 736 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC010301.1-201ENST00000473936 355 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC004062.1-201ENST00000509926 645 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-1102P-201ENST00000516149 96 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 SNORA70.18-201ENST00000516696 98 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 OR8I1P-201ENST00000529291 931 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC00557-201ENST00000563184 1279 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 BPTFP1-201ENST00000579209 492 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AP001029.3-201ENST00000588063 596 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC006557.5-201ENST00000603126 811 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 VN1R9P-201ENST00000614184 867 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC092650.2-201ENST00000619984 902 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AL118508.4-201ENST00000624142 1176 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC034229.5-201ENST00000624258 185 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 AC130650.2-201ENST00000618736 2403 ntBASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCNB1IP1Q9NPC3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-650P-201ENST00000365658 111 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MIR200C-201ENST00000384980 68 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MIR218-2-201ENST00000385006 110 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RNA5SP44-201ENST00000410446 133 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RAB9AP3-201ENST00000412737 573 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL445183.3-201ENST00000414168 502 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RPS7P15-201ENST00000415804 584 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL357078.2-201ENST00000416486 427 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 MTCO3P12-201ENST00000416718 547 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RPL7P46-201ENST00000425129 740 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC073063.1-201ENST00000434352 607 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 HSPD1P21-201ENST00000436541 245 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 RAB9AP1-201ENST00000449393 573 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AL136126.1-201ENST00000473603 402 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC020898.1-201ENST00000474167 787 ntBASIC3.07□□□□□ -1.92
CCNB1IP1Q9NPC3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms