Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 NDUFB4P4-201ENST00000404822 243 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 AL139100.1-201ENST00000408001 498 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 RNU6-141P-201ENST00000410499 105 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 MICG-208ENST00000416822 132 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 AC002075.2-201ENST00000425207 252 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 CYCSP44-201ENST00000448560 313 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 IGLVIV-53-201ENST00000520107 367 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 RN7SL178P-201ENST00000582930 304 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 AC131392.2-201ENST00000505635 4332 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 SPARC-201ENST00000231061 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 THADA-202ENST00000402360 2974 ntTSL 5 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RNF39Q9H2S5 SALL1P1-201ENST00000438101 3837 ntBASIC7.99□□□□□ -1.13
RNF39Q9H2S5 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AC068769.1-201ENST00000474767 2426 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 SNORD115-30-201ENST00000364117 82 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 RNU6-644P-201ENST00000391155 98 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 SNORA3.1-201ENST00000408166 111 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AC007064.1-201ENST00000412238 351 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AL691449.1-201ENST00000426570 421 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AL358232.1-201ENST00000448030 501 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 YRDCP3-201ENST00000456507 480 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 snoU109.4-201ENST00000458953 143 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 RNU6-1299P-201ENST00000516316 100 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AC040162.2-201ENST00000573092 157 ntBASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
RNF39Q9H2S5 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC104964.2-201ENST00000562242 4641 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RNU5A-1-201ENST00000362698 116 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RNA5SP218-201ENST00000363188 109 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RNU6-1099P-201ENST00000363533 107 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RNU6-616P-201ENST00000384353 107 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 RPL30P3-201ENST00000424262 333 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC134879.1-201ENST00000426062 394 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AL161626.1-201ENST00000441480 490 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 PTMAP1-205ENST00000455552 325 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC091179.3-201ENST00000474761 144 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 PPIAP19-201ENST00000486414 492 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 SNORA70.11-201ENST00000515987 138 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 SNORA70.13-201ENST00000516116 138 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC107952.1-201ENST00000524200 376 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AC211433.3-201ENST00000623770 375 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF39Q9H2S5 AP003972.1-201ENST00000625192 5446 ntBASIC7.97□□□□□ -1.13
RNF39Q9H2S5 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms