Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 MIR7154-201ENST00000620673 73 ntBASIC4.95□□□□□ -1.62
NUP88Q99567 AC004009.2-201ENST00000623016 728 ntBASIC4.95□□□□□ -1.62
NUP88Q99567 AL356121.2-201ENST00000624715 780 ntBASIC4.95□□□□□ -1.62
NUP88Q99567 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NUP88Q99567 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
NUP88Q99567 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP88Q99567 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP88Q99567 OR11H5P-202ENST00000641612 1325 ntBASIC4.95□□□□□ -1.62
NUP88Q99567 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NUP88Q99567 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP88Q99567 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP88Q99567 KPNA2P2-201ENST00000419546 1489 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NUP88Q99567 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC010300.1-201ENST00000600671 5134 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
NUP88Q99567 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC067945.1-201ENST00000342609 618 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 RNU6-28P-201ENST00000362378 107 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 RNU1-108P-201ENST00000362556 161 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 RNU6-623P-201ENST00000363143 105 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 Y_RNA.553-201ENST00000384670 102 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 SNORD66.1-201ENST00000391230 76 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 PSMA6P3-201ENST00000428242 164 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AL512649.1-201ENST00000428997 581 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AL117339.2-201ENST00000430475 180 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP88Q99567 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC091564.1-201ENST00000464563 479 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 RPL31P50-201ENST00000471002 296 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC104563.1-201ENST00000476147 376 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AL592156.1-201ENST00000508758 304 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC034159.1-201ENST00000513885 583 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC099522.1-202ENST00000514718 367 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC025881.1-201ENST00000518851 512 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP88Q99567 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP88Q99567 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.94□□□□□ -1.62
NUP88Q99567 MTND6P33-201ENST00000571794 183 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP88Q99567 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 AC099669.2-201ENST00000616549 437 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP88Q99567 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.94□□□□□ -1.62
NUP88Q99567 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.94□□□□□ -1.62
NUP88Q99567 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUP88Q99567 SAGE4P-201ENST00000442271 3381 ntBASIC4.94□□□□□ -1.62
NUP88Q99567 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.94□□□□□ -1.62
NUP88Q99567 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUP88Q99567 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NUP88Q99567 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP88Q99567 RN7SKP280-201ENST00000364196 304 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUP88Q99567 RNU2-15P-201ENST00000410692 191 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP88Q99567 RPL17P12-201ENST00000413391 526 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 MTCO2P34-201ENST00000421994 607 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.93□□□□□ -1.62
NUP88Q99567 CKS1BP5-201ENST00000434172 273 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 CDC27P1-201ENST00000445384 715 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 HSFY6P-201ENST00000445573 403 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 RPL23AP81-201ENST00000455252 467 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 DNAJC19P1-201ENST00000455312 319 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 NUP58P1-201ENST00000502546 1738 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 MTCO3P44-201ENST00000510977 541 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 RNA5SP73-201ENST00000516744 108 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 COX6CP8-201ENST00000522620 226 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 OR5AP1P-201ENST00000529730 940 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 OR8L1P-201ENST00000534005 955 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 OR8R1P-201ENST00000543943 764 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.93□□□□□ -1.62
NUP88Q99567 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
NUP88Q99567 MIR3611-201ENST00000584484 83 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 AC083760.1-201ENST00000589621 670 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 AC022916.3-201ENST00000592961 742 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 U73479.1-201ENST00000618062 168 ntBASIC4.93□□□□□ -1.62
NUP88Q99567 AC009878.1-201ENST00000621819 340 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms