Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 U4.3-201ENST00000621047 82 ntBASIC1.53□□□□□ -2.17
VPS13BQ7Z7G8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
VPS13BQ7Z7G8 MIR1291-201ENST00000627649 87 ntBASIC1.53□□□□□ -2.17
VPS13BQ7Z7G8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
VPS13BQ7Z7G8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 RHEBP3-201ENST00000411920 351 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AL606490.7-201ENST00000433136 191 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC096725.1-201ENST00000514266 313 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 RNU6-295P-201ENST00000516901 104 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 RNA5SP380-201ENST00000517190 98 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 HMGB3P26-201ENST00000560051 582 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC023813.4-201ENST00000607580 580 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC092628.2-201ENST00000622492 339 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC026523.2-201ENST00000625039 7739 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AL512430.2-201ENST00000406786 339 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AL445213.1-201ENST00000412589 747 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC105402.2-201ENST00000438503 358 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC007677.1-201ENST00000445757 515 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC021733.2-201ENST00000518830 497 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AK6P1-201ENST00000540219 478 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC022069.1-201ENST00000582910 658 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 OR11H5P-202ENST00000641612 1325 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 RNU1-87P-201ENST00000363727 170 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 RNU6-253P-201ENST00000384730 105 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 USP9YP20-201ENST00000419224 558 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 RPL7P52-201ENST00000449200 742 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 TRAV37-201ENST00000553906 342 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC009570.1-201ENST00000609599 745 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 AC138915.3-201ENST00000562908 1389 ntBASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS13BQ7Z7G8 U8.13-201ENST00000390842 128 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC073136.2-201ENST00000417282 849 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC091917.2-201ENST00000505002 744 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 MIR3605-201ENST00000583214 100 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC009318.2-201ENST00000610917 651 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 MIR6873-201ENST00000622788 63 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC103798.2-201ENST00000624292 632 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AP000526.1-201ENST00000603308 1388 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC124916.1-201ENST00000444020 547 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 KCTD9P5-201ENST00000504141 1170 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 ZNF355P-201ENST00000427301 3216 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC117529.2-201ENST00000512159 2068 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AL662791.1-201ENST00000441992 928 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 HMGB3P8-201ENST00000449709 577 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC103975.1-201ENST00000482506 483 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 RNA5SP281-201ENST00000516504 135 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 MIR2114-201ENST00000516645 80 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AL591516.1-201ENST00000611326 274 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS13BQ7Z7G8 AL024474.1-201ENST00000404655 591 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 ATG3P1-201ENST00000419507 911 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 COX6CP2-201ENST00000444980 225 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 AC026436.1-201ENST00000510537 270 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 RN7SKP60-201ENST00000516985 239 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 NPM1P35-201ENST00000533043 868 ntBASIC1.5□□□□□ -2.17
VPS13BQ7Z7G8 OR4H12P-201ENST00000556269 907 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms