Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CR383658.2-201ENST00000547576 1525 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 RNU1-75P-201ENST00000347264 129 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AP002088.1-201ENST00000382740 395 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 RPL31P1-201ENST00000398116 372 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 ATF1P1-201ENST00000406040 927 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 RPS7P13-201ENST00000413955 498 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC073508.1-201ENST00000428866 656 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 RPS26P30-201ENST00000443431 335 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 Z75741.1-201ENST00000446793 314 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 snoU13.4-201ENST00000458916 104 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 MTND4LP22-201ENST00000508209 276 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 MTCO3P44-201ENST00000510977 541 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC006518.1-201ENST00000541449 943 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 OR4H6P-202ENST00000603819 340 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AL365400.2-201ENST00000605604 902 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC091953.5-201ENST00000622919 233 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AL163152.1-201ENST00000642001 374 ntBASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
H3F3CQ6NXT2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC005183.1-201ENST00000603687 1979 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 SNORA38.1-201ENST00000364172 131 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 RNU6-339P-201ENST00000384310 107 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 RNU6-441P-201ENST00000384545 106 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 SKINT1L-201ENST00000401057 817 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 RNU4-65P-201ENST00000410473 140 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 RNA5SP293-201ENST00000410527 113 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 RNU4-47P-201ENST00000410876 114 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 Z99755.1-201ENST00000414048 380 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AL158071.1-201ENST00000430315 461 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 BX679664.1-201ENST00000434429 253 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ATP5C1P1-201ENST00000441945 895 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC097262.1-201ENST00000452559 548 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC025181.1-201ENST00000477507 416 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ACTG1P13-201ENST00000486987 1043 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC021678.1-201ENST00000505195 936 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 HIGD1AP6-201ENST00000521833 279 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 IGHV3-76-201ENST00000522465 295 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 MIR5680-201ENST00000577577 84 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ZNF415P1-201ENST00000582279 1166 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AP001029.3-201ENST00000588063 596 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 VN1R88P-201ENST00000596787 292 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC040174.2-201ENST00000602701 465 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC009948.4-201ENST00000604692 675 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC073657.2-201ENST00000605661 303 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AL354696.1-201ENST00000614652 497 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC110801.1-201ENST00000623590 212 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 HPVC1-201ENST00000629899 1198 ntBASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H3F3CQ6NXT2 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.92
H3F3CQ6NXT2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
H3F3CQ6NXT2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
H3F3CQ6NXT2 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.92
H3F3CQ6NXT2 MTND5P27-201ENST00000428871 1720 ntBASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
H3F3CQ6NXT2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms