Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 GUCY1B2-204ENST00000531898 1979 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 COX6B1P3-201ENST00000312310 260 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 RNA5SP110-201ENST00000362638 115 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 U3.43-201ENST00000410734 213 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 USMG5P1-201ENST00000425964 177 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AL359672.1-201ENST00000442302 409 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 GAPDHP23-201ENST00000444823 993 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 U8.20-201ENST00000459445 131 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 RN7SL189P-201ENST00000468631 289 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC103987.1-201ENST00000473394 348 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC012123.2-201ENST00000485809 248 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 SCARNA16.2-201ENST00000516520 172 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 TRIM77BP-201ENST00000524985 1119 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AP005639.1-201ENST00000526939 192 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 CYCSP38-201ENST00000559840 322 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC092121.1-201ENST00000569452 202 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC104695.3-201ENST00000604052 296 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 PRR13P7-201ENST00000605538 430 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC007619.2-201ENST00000605743 379 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AL118522.2-201ENST00000616045 615 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 MIR6861-201ENST00000618657 64 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 MIR7159-201ENST00000620587 66 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC067931.1-201ENST00000624190 671 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AL451142.2-201ENST00000429076 2090 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC005592.1-201ENST00000566527 1640 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TMEM259Q4ZIN3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
TMEM259Q4ZIN3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.4
TMEM259Q4ZIN3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 SNORA51.9-201ENST00000384295 124 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC004386.1-201ENST00000393214 761 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 RPL21P67-201ENST00000402896 478 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC080125.1-201ENST00000414888 684 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC115283.1-201ENST00000427353 400 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 USP9YP30-201ENST00000430729 455 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 CECR9-201ENST00000453421 199 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 HMGB3P30-201ENST00000457863 606 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC068228.1-201ENST00000461723 211 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AP000926.1-201ENST00000479573 241 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC092451.1-201ENST00000480211 153 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AC110794.1-201ENST00000505816 425 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 RNU6-120P-201ENST00000516077 103 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 RNU6-307P-201ENST00000516743 106 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 RN7SKP234-201ENST00000517173 224 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 OR8R1P-201ENST00000543943 764 ntBASIC6.27□□□□□ -1.41
TMEM259Q4ZIN3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms