Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ELOCP19-201ENST00000411919 318 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 HMGB3P23-201ENST00000414981 585 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL031779.1-201ENST00000415663 330 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 SPA17P1-201ENST00000416656 452 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL732292.1-201ENST00000426692 226 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 RSL24D1P6-201ENST00000426934 401 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL139099.1-201ENST00000497398 403 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 DUXAP2-201ENST00000519198 589 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AP003497.1-201ENST00000528472 562 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 TOMM20P2-201ENST00000540082 421 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 CR383656.7-201ENST00000548164 174 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 MTND1P15-201ENST00000579262 949 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 RPL12P25-202ENST00000598100 674 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC015871.2-201ENST00000603605 948 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC090578.1-201ENST00000604955 591 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL590392.1-201ENST00000604960 446 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL121932.1-201ENST00000605542 214 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC092354.2-201ENST00000607786 514 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC006338.2-201ENST00000616864 791 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AC072046.2-201ENST00000618366 268 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 MTND5P33-201ENST00000571250 1450 ntBASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC144BQ3MJ40 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 RNU6-1249P-201ENST00000363237 111 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 RNU5A-6P-201ENST00000384136 116 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 MRPL42P2-201ENST00000403169 426 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 U3.35-201ENST00000408405 208 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AL645608.4-201ENST00000423619 154 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 RPEP3-201ENST00000425462 676 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 MTND6P13-201ENST00000443510 523 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 UBDP1-202ENST00000457888 382 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 TPT1P7-201ENST00000458300 517 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 RPL7P15-201ENST00000461190 712 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC091868.1-201ENST00000508746 304 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 NPM1P41-201ENST00000512920 831 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AL157394.1-201ENST00000562983 1224 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 MIR5699-201ENST00000578903 90 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AL356218.2-201ENST00000605264 187 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC121334.2-201ENST00000605387 271 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC091979.2-201ENST00000607514 214 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC009159.1-201ENST00000618386 642 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AC018755.4-201ENST00000619715 454 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AL161637.1-201ENST00000622380 412 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 AL442639.1-201ENST00000625030 1899 ntBASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC144BQ3MJ40 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC144BQ3MJ40 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms