Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.25□□□□□ -1.89
RORAP35398 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.25□□□□□ -1.89
RORAP35398 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.25□□□□□ -1.89
RORAP35398 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.25□□□□□ -1.89
RORAP35398 AC037471.2-201ENST00000564941 598 ntBASIC3.25□□□□□ -1.89
RORAP35398 MTCYBP28-201ENST00000566728 1132 ntBASIC3.25□□□□□ -1.89
RORAP35398 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.25□□□□□ -1.89
RORAP35398 AC006557.5-201ENST00000603126 811 ntBASIC3.25□□□□□ -1.89
RORAP35398 YPEL5P2-201ENST00000605553 359 ntBASIC3.25□□□□□ -1.89
RORAP35398 AC112503.2-201ENST00000609005 552 ntBASIC3.25□□□□□ -1.89
RORAP35398 AL390240.1-201ENST00000612950 384 ntBASIC3.25□□□□□ -1.89
RORAP35398 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
RORAP35398 AC006963.1-201ENST00000624003 1052 ntBASIC3.25□□□□□ -1.89
RORAP35398 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.25□□□□□ -1.89
RORAP35398 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.25□□□□□ -1.89
RORAP35398 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.25□□□□□ -1.89
RORAP35398 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 ELL2P4-201ENST00000446870 1376 ntBASIC3.25□□□□□ -1.89
RORAP35398 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RORAP35398 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 SRP72P2-201ENST00000344851 1979 ntBASIC3.24□□□□□ -1.89
RORAP35398 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.24□□□□□ -1.89
RORAP35398 RNU6-1151P-201ENST00000384684 107 ntBASIC3.24□□□□□ -1.89
RORAP35398 SNORD65C-201ENST00000390962 71 ntBASIC3.24□□□□□ -1.89
RORAP35398 RNU1-101P-201ENST00000391171 127 ntBASIC3.24□□□□□ -1.89
RORAP35398 RPL17P50-201ENST00000396131 546 ntBASIC3.24□□□□□ -1.89
RORAP35398 AL354719.1-201ENST00000406535 843 ntBASIC3.24□□□□□ -1.89
RORAP35398 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.24□□□□□ -1.89
RORAP35398 BX664727.1-201ENST00000416024 466 ntBASIC3.24□□□□□ -1.89
RORAP35398 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.24□□□□□ -1.89
RORAP35398 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.24□□□□□ -1.89
RORAP35398 AL357552.1-201ENST00000445254 415 ntBASIC3.24□□□□□ -1.89
RORAP35398 HMGB1P15-201ENST00000453854 435 ntBASIC3.24□□□□□ -1.89
RORAP35398 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.24□□□□□ -1.89
RORAP35398 BTF3P5-201ENST00000457252 467 ntBASIC3.24□□□□□ -1.89
RORAP35398 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.24□□□□□ -1.89
RORAP35398 SETP6-201ENST00000479329 568 ntBASIC3.24□□□□□ -1.89
RORAP35398 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.24□□□□□ -1.89
RORAP35398 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.24□□□□□ -1.89
RORAP35398 RNU6-416P-201ENST00000516265 103 ntBASIC3.24□□□□□ -1.89
RORAP35398 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
RORAP35398 RNA5SP468-201ENST00000516782 93 ntBASIC3.24□□□□□ -1.89
RORAP35398 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.24□□□□□ -1.89
RORAP35398 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 AP003049.1-201ENST00000529418 457 ntBASIC3.24□□□□□ -1.89
RORAP35398 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.24□□□□□ -1.89
RORAP35398 AC004217.3-201ENST00000551552 878 ntBASIC3.24□□□□□ -1.89
RORAP35398 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.24□□□□□ -1.89
RORAP35398 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.24□□□□□ -1.89
RORAP35398 MIR4738-201ENST00000579134 87 ntBASIC3.24□□□□□ -1.89
RORAP35398 AC067852.3-201ENST00000589177 561 ntBASIC3.24□□□□□ -1.89
RORAP35398 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.24□□□□□ -1.89
RORAP35398 AC098483.2-201ENST00000603158 454 ntBASIC3.24□□□□□ -1.89
RORAP35398 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
RORAP35398 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.24□□□□□ -1.89
RORAP35398 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RORAP35398 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RORAP35398 MTCO1P4-201ENST00000520516 1409 ntBASIC3.24□□□□□ -1.89
RORAP35398 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
RORAP35398 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 AC002546.1-201ENST00000588041 2504 ntBASIC3.23□□□□□ -1.89
RORAP35398 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RORAP35398 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 RNU6-609P-201ENST00000365459 107 ntBASIC3.23□□□□□ -1.89
RORAP35398 AL136116.1-201ENST00000403591 381 ntBASIC3.23□□□□□ -1.89
RORAP35398 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.23□□□□□ -1.89
RORAP35398 RNU6-77P-201ENST00000410554 91 ntBASIC3.23□□□□□ -1.89
RORAP35398 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.23□□□□□ -1.89
RORAP35398 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 MTCO2P1-201ENST00000424648 477 ntBASIC3.23□□□□□ -1.89
RORAP35398 UBE2D3P3-201ENST00000426992 425 ntBASIC3.23□□□□□ -1.89
RORAP35398 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.23□□□□□ -1.89
RORAP35398 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.23□□□□□ -1.89
RORAP35398 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.23□□□□□ -1.89
RORAP35398 RPL17P49-201ENST00000443728 411 ntBASIC3.23□□□□□ -1.89
RORAP35398 RPS26P56-201ENST00000444468 240 ntBASIC3.23□□□□□ -1.89
RORAP35398 AL929288.2-201ENST00000446368 407 ntBASIC3.23□□□□□ -1.89
RORAP35398 AC005002.1-201ENST00000447458 540 ntBASIC3.23□□□□□ -1.89
RORAP35398 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RORAP35398 GTF2IP12-201ENST00000456547 356 ntBASIC3.23□□□□□ -1.89
RORAP35398 snoU13.24-201ENST00000458998 104 ntBASIC3.23□□□□□ -1.89
RORAP35398 RPL32P14-201ENST00000463196 378 ntBASIC3.23□□□□□ -1.89
RORAP35398 PRDX3P4-201ENST00000470828 747 ntBASIC3.23□□□□□ -1.89
RORAP35398 HMGN2P13-201ENST00000476476 274 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms