Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.53□□□□□ -2.16
APOBP04114 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.53□□□□□ -2.16
APOBP04114 AP001207.1-201ENST00000524051 481 ntBASIC1.53□□□□□ -2.16
APOBP04114 NRBF2P1-201ENST00000587407 859 ntBASIC1.53□□□□□ -2.16
APOBP04114 AL365503.1-201ENST00000605247 905 ntBASIC1.53□□□□□ -2.16
APOBP04114 CR589904.2-201ENST00000612533 440 ntBASIC1.53□□□□□ -2.16
APOBP04114 AC090897.3-201ENST00000636973 1157 ntBASIC1.53□□□□□ -2.16
APOBP04114 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
APOBP04114 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.17
APOBP04114 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
APOBP04114 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.53□□□□□ -2.17
APOBP04114 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
APOBP04114 RNU6-661P-201ENST00000362409 107 ntBASIC1.52□□□□□ -2.17
APOBP04114 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC017078.1-201ENST00000416146 368 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.52□□□□□ -2.17
APOBP04114 AC005046.1-201ENST00000608515 625 ntBASIC1.52□□□□□ -2.17
APOBP04114 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
APOBP04114 SNORD62.1-201ENST00000362541 86 ntBASIC1.52□□□□□ -2.17
APOBP04114 RNU1-87P-201ENST00000363727 170 ntBASIC1.52□□□□□ -2.17
APOBP04114 RNU6-253P-201ENST00000384730 105 ntBASIC1.52□□□□□ -2.17
APOBP04114 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.52□□□□□ -2.17
APOBP04114 AL365396.1-201ENST00000430854 671 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC106872.2-201ENST00000494303 480 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.52□□□□□ -2.17
APOBP04114 AC026464.5-201ENST00000562497 722 ntBASIC1.52□□□□□ -2.17
APOBP04114 WISP1-OT1-201ENST00000602893 642 ntBASIC1.52□□□□□ -2.17
APOBP04114 AL008729.2-201ENST00000606393 473 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC073869.7-201ENST00000640874 297 ntBASIC1.52□□□□□ -2.17
APOBP04114 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
APOBP04114 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.52□□□□□ -2.17
APOBP04114 AL024509.2-201ENST00000493462 493 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.52□□□□□ -2.17
APOBP04114 AL451049.1-201ENST00000608672 497 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC004825.2-201ENST00000616634 455 ntBASIC1.52□□□□□ -2.17
APOBP04114 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.52□□□□□ -2.17
APOBP04114 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.52□□□□□ -2.17
APOBP04114 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.52□□□□□ -2.17
APOBP04114 MRPL50P4-201ENST00000446432 475 ntBASIC1.52□□□□□ -2.17
APOBP04114 RPL23AP14-201ENST00000468281 468 ntBASIC1.52□□□□□ -2.17
APOBP04114 AC126182.1-201ENST00000478134 357 ntBASIC1.52□□□□□ -2.17
APOBP04114 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.52□□□□□ -2.17
APOBP04114 AL109741.3-201ENST00000561748 592 ntBASIC1.52□□□□□ -2.17
APOBP04114 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.52□□□□□ -2.17
APOBP04114 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
APOBP04114 AC016717.2-201ENST00000609089 5141 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC004925.1-201ENST00000624256 2706 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC117529.2-201ENST00000512159 2068 ntBASIC1.51□□□□□ -2.17
APOBP04114 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.51□□□□□ -2.17
APOBP04114 AC080125.1-201ENST00000414888 684 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.51□□□□□ -2.17
APOBP04114 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.51□□□□□ -2.17
APOBP04114 BTG3P1-201ENST00000435859 716 ntBASIC1.51□□□□□ -2.17
APOBP04114 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.51□□□□□ -2.17
APOBP04114 VN1R17P-201ENST00000472048 1090 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC092185.1-201ENST00000491371 97 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC108729.3-201ENST00000513484 108 ntBASIC1.51□□□□□ -2.17
APOBP04114 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.51□□□□□ -2.17
APOBP04114 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
APOBP04114 AC090229.1-201ENST00000590983 1609 ntBASIC1.51□□□□□ -2.17
APOBP04114 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.51□□□□□ -2.17
APOBP04114 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.51□□□□□ -2.17
APOBP04114 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
APOBP04114 USP9YP20-201ENST00000419224 558 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.51□□□□□ -2.17
APOBP04114 AP000893.1-201ENST00000474462 794 ntBASIC1.51□□□□□ -2.17
APOBP04114 RN7SKP219-201ENST00000516825 296 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.51□□□□□ -2.17
APOBP04114 AC110741.2-201ENST00000605278 268 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC103710.2-201ENST00000609912 942 ntBASIC1.51□□□□□ -2.17
APOBP04114 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
APOBP04114 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
APOBP04114 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
APOBP04114 AL355379.1-201ENST00000405542 640 ntBASIC1.51□□□□□ -2.17
APOBP04114 RN7SKP247-201ENST00000411094 308 ntBASIC1.51□□□□□ -2.17
APOBP04114 AL159169.1-201ENST00000421119 127 ntBASIC1.51□□□□□ -2.17
APOBP04114 MTCO3P20-201ENST00000454926 688 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC092045.1-201ENST00000495716 1231 ntBASIC1.51□□□□□ -2.17
APOBP04114 RNA5SP380-201ENST00000517190 98 ntBASIC1.51□□□□□ -2.17
APOBP04114 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.51□□□□□ -2.17
APOBP04114 AC128657.1-201ENST00000549459 145 ntBASIC1.51□□□□□ -2.17
APOBP04114 MIR6873-201ENST00000622788 63 ntBASIC1.51□□□□□ -2.17
APOBP04114 MTND5P19-201ENST00000424872 1794 ntBASIC1.51□□□□□ -2.17
APOBP04114 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
APOBP04114 GABPAP-201ENST00000419271 1356 ntBASIC1.51□□□□□ -2.17
APOBP04114 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.51□□□□□ -2.17
APOBP04114 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.51□□□□□ -2.17
APOBP04114 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.51□□□□□ -2.17
APOBP04114 AL512646.1-201ENST00000269395 1077 ntBASIC1.5□□□□□ -2.17
APOBP04114 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
APOBP04114 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.5□□□□□ -2.17
APOBP04114 RPS15AP28-201ENST00000435088 386 ntBASIC1.5□□□□□ -2.17
APOBP04114 RPS26P30-201ENST00000443431 335 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms