Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.87□□□□□ -1.79
O00370 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
O00370 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
O00370 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
O00370 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
O00370 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
O00370 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
O00370 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 MIR607-201ENST00000385241 96 ntBASIC3.86□□□□□ -1.79
O00370 RPL21P17-201ENST00000397467 475 ntBASIC3.86□□□□□ -1.79
O00370 HSPE1P26-201ENST00000405341 275 ntBASIC3.86□□□□□ -1.79
O00370 RNU6ATAC-201ENST00000408749 126 ntBASIC3.86□□□□□ -1.79
O00370 RNU2-42P-201ENST00000410697 113 ntBASIC3.86□□□□□ -1.79
O00370 RAB9AP3-201ENST00000412737 573 ntBASIC3.86□□□□□ -1.79
O00370 AC009237.5-201ENST00000414271 501 ntBASIC3.86□□□□□ -1.79
O00370 HIGD1AP15-201ENST00000416198 280 ntBASIC3.86□□□□□ -1.79
O00370 AL356320.2-201ENST00000417263 507 ntBASIC3.86□□□□□ -1.79
O00370 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
O00370 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.86□□□□□ -1.79
O00370 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.86□□□□□ -1.79
O00370 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.86□□□□□ -1.79
O00370 RPL23AP76-201ENST00000441860 458 ntBASIC3.86□□□□□ -1.79
O00370 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.86□□□□□ -1.79
O00370 RAB9AP1-201ENST00000449393 573 ntBASIC3.86□□□□□ -1.79
O00370 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.86□□□□□ -1.79
O00370 AC091153.1-201ENST00000466297 402 ntBASIC3.86□□□□□ -1.79
O00370 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
O00370 VPS26AP1-201ENST00000483197 979 ntBASIC3.86□□□□□ -1.79
O00370 RPL21P129-201ENST00000491732 478 ntBASIC3.86□□□□□ -1.79
O00370 RPL23AP55-201ENST00000498163 452 ntBASIC3.86□□□□□ -1.79
O00370 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.86□□□□□ -1.79
O00370 RNA5SP135-201ENST00000517019 125 ntBASIC3.86□□□□□ -1.79
O00370 RNU1-45P-201ENST00000517191 141 ntBASIC3.86□□□□□ -1.79
O00370 AC023632.4-201ENST00000517783 191 ntBASIC3.86□□□□□ -1.79
O00370 RANP9-201ENST00000519957 271 ntBASIC3.86□□□□□ -1.79
O00370 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 EEF1A1P37-201ENST00000522748 715 ntBASIC3.86□□□□□ -1.79
O00370 MTCO1P49-201ENST00000523429 802 ntBASIC3.86□□□□□ -1.79
O00370 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.86□□□□□ -1.79
O00370 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.86□□□□□ -1.79
O00370 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
O00370 GTF2IP8-201ENST00000560687 584 ntBASIC3.86□□□□□ -1.79
O00370 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.86□□□□□ -1.79
O00370 MIR3912-201ENST00000577566 105 ntBASIC3.86□□□□□ -1.79
O00370 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.86□□□□□ -1.79
O00370 AP001269.3-201ENST00000588718 329 ntBASIC3.86□□□□□ -1.79
O00370 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.86□□□□□ -1.79
O00370 AC113368.1-201ENST00000603736 382 ntBASIC3.86□□□□□ -1.79
O00370 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.86□□□□□ -1.79
O00370 AC016877.3-201ENST00000606778 504 ntBASIC3.86□□□□□ -1.79
O00370 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
O00370 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.86□□□□□ -1.79
O00370 AL732618.1-201ENST00000623251 301 ntBASIC3.86□□□□□ -1.79
O00370 AC068620.4-201ENST00000636730 1182 ntBASIC3.86□□□□□ -1.79
O00370 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.86□□□□□ -1.79
O00370 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
O00370 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
O00370 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
O00370 ZNF285B-201ENST00000561698 1767 ntBASIC3.85□□□□□ -1.79
O00370 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
O00370 SNORD6-201ENST00000365444 73 ntBASIC3.85□□□□□ -1.79
O00370 MTND4P22-201ENST00000413116 1169 ntBASIC3.85□□□□□ -1.79
O00370 AL035423.1-201ENST00000420331 213 ntBASIC3.85□□□□□ -1.79
O00370 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.85□□□□□ -1.79
O00370 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.85□□□□□ -1.79
O00370 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.85□□□□□ -1.79
O00370 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.85□□□□□ -1.79
O00370 CR769776.1-201ENST00000441254 787 ntBASIC3.85□□□□□ -1.79
O00370 AL133547.1-201ENST00000448546 220 ntBASIC3.85□□□□□ -1.79
O00370 RPL7L1P8-201ENST00000469911 741 ntBASIC3.85□□□□□ -1.79
O00370 AC108734.3-201ENST00000481241 1165 ntBASIC3.85□□□□□ -1.79
O00370 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.85□□□□□ -1.79
O00370 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.85□□□□□ -1.79
O00370 RNU1-95P-201ENST00000516357 160 ntBASIC3.85□□□□□ -1.79
O00370 RNU1-128P-201ENST00000516704 160 ntBASIC3.85□□□□□ -1.79
O00370 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.85□□□□□ -1.79
O00370 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.85□□□□□ -1.79
O00370 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.85□□□□□ -1.79
O00370 AP001189.2-201ENST00000527320 189 ntBASIC3.85□□□□□ -1.79
O00370 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.85□□□□□ -1.79
O00370 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.85□□□□□ -1.79
O00370 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.85□□□□□ -1.79
O00370 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms