Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC245291.3-201ENST00000443400 292 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC087190.1-201ENST00000484462 480 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC107032.1-201ENST00000485945 480 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 RPS4XP20-201ENST00000505751 772 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 RNU6-677P-201ENST00000516914 101 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC023245.2-201ENST00000530760 2978 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AL589743.6-201ENST00000611025 117 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 TCL6_3.1-201ENST00000619064 137 ntBASIC6.15□□□□□ -1.42
PRDM9Q9NQV7 AC007529.1-201ENST00000418574 2178 ntBASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 ZNF299P-201ENST00000406845 1804 ntBASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.15□□□□□ -1.43
PRDM9Q9NQV7 AC110597.1-201ENST00000562669 3176 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 Y_RNA.8-201ENST00000362353 102 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RNU6-1290P-201ENST00000362957 109 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 SNORA64.3-201ENST00000365647 134 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RNU6-701P-201ENST00000384059 107 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 SNORD51-201ENST00000384320 80 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AL109941.1-201ENST00000401925 229 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RN7SKP221-201ENST00000410420 301 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RNU6-735P-201ENST00000410612 107 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 MRPS21P5-201ENST00000417885 231 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AL031736.2-201ENST00000426573 787 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC010655.1-201ENST00000449336 292 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC010733.1-201ENST00000451515 401 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 SNX18P26-201ENST00000458433 740 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC109925.1-201ENST00000478069 331 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RPS24P16-201ENST00000497294 392 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 Y_RNA.689-201ENST00000516589 107 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AF186190.1-201ENST00000517470 480 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC139365.2-201ENST00000517972 253 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC067852.5-201ENST00000589299 310 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RNU6-85P-201ENST00000605989 107 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC005344.1-201ENST00000613391 459 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AL132640.3-201ENST00000630473 177 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC005183.1-201ENST00000603687 1979 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC007159.1-201ENST00000566529 4706 ntBASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
PRDM9Q9NQV7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PRDM9Q9NQV7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms