Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 SNORA62-201ENST00000365493 153 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 SNORA70F-201ENST00000384142 135 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 GLULP6-201ENST00000399502 913 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 HMGB1P17-201ENST00000403495 628 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 RNU6-648P-201ENST00000410190 107 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 RNA5SP239-201ENST00000410218 129 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC007899.1-201ENST00000412776 775 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 RPS27AP14-201ENST00000422868 454 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AL445669.1-201ENST00000426743 755 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 OR4F13P-201ENST00000428478 931 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 MTND5P14-201ENST00000441481 1267 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC017015.1-201ENST00000477387 286 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC093809.1-201ENST00000509155 340 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC006499.6-201ENST00000511169 607 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC016065.2-201ENST00000514530 444 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 RNA5SP216-201ENST00000516111 123 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AL352979.3-201ENST00000553515 247 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC010546.1-201ENST00000569391 485 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 AP001180.3-201ENST00000582221 145 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 AC099669.2-201ENST00000616549 437 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 TEX21P-201ENST00000447107 1476 ntBASIC4.41□□□□□ -1.7
VPS50Q96JG6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VPS50Q96JG6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VPS50Q96JG6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.4□□□□□ -1.7
VPS50Q96JG6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS50Q96JG6 AL356473.1-201ENST00000406203 1408 ntBASIC4.4□□□□□ -1.7
VPS50Q96JG6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VPS50Q96JG6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
VPS50Q96JG6 AL592148.3-201ENST00000608771 2646 ntBASIC4.4□□□□□ -1.7
VPS50Q96JG6 RNU6-343P-201ENST00000364709 104 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 MIR513A2-201ENST00000385249 127 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 U8.14-201ENST00000390843 143 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 RNU1-82P-201ENST00000390851 165 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AL049697.2-201ENST00000403708 294 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 OR8G2P-201ENST00000412796 908 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 RPL17P12-201ENST00000413391 526 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 NUP35P2-201ENST00000416748 943 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC069213.2-201ENST00000420238 366 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 COX6CP17-201ENST00000421389 185 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VPS50Q96JG6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.4□□□□□ -1.71
VPS50Q96JG6 SSXP1-201ENST00000453640 473 ntBASIC4.4□□□□□ -1.71
VPS50Q96JG6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms