Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-CQ95604 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
HLA-CQ95604 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-CQ95604 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-CQ95604 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-CQ95604 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
HLA-CQ95604 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HLA-CQ95604 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 MAPK10-270ENST00000641102 3538 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 RN7SKP128-201ENST00000364270 303 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 Y_RNA.462-201ENST00000384268 102 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 RNU6-611P-201ENST00000384276 104 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 SNORD58.1-201ENST00000391313 66 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.39□□□□□ -1.39
HLA-CQ95604 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AL031274.1-201ENST00000450334 232 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 PCMTD1P1-201ENST00000455560 355 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 snoU109.4-201ENST00000458953 143 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 RNU7-187P-201ENST00000458985 68 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 RN7SL561P-201ENST00000488553 281 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.39□□□□□ -1.39
HLA-CQ95604 HMGN2P6-201ENST00000551091 273 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.39□□□□□ -1.39
HLA-CQ95604 FXNP1-201ENST00000555153 337 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AL049872.1-201ENST00000556323 322 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AC025588.3-201ENST00000604182 274 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AC004792.1-201ENST00000614523 137 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 CU639417.4-201ENST00000623928 207 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AC091925.2-201ENST00000625059 256 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 AL132640.3-201ENST00000630473 177 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-CQ95604 AC062022.1-201ENST00000451026 1684 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
HLA-CQ95604 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-CQ95604 AC110597.1-201ENST00000562669 3176 ntBASIC6.39□□□□□ -1.39
HLA-CQ95604 DDX10P1-201ENST00000448545 1933 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
HLA-CQ95604 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-CQ95604 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HLA-CQ95604 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HLA-CQ95604 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.38□□□□□ -1.39
HLA-CQ95604 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 AC092111.1-201ENST00000618256 3358 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.38□□□□□ -1.39
HLA-CQ95604 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-CQ95604 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HLA-CQ95604 RNU6-280P-201ENST00000364145 104 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RNU6-1329P-201ENST00000365664 107 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RNU6-886P-201ENST00000384319 105 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 SNORA51.11-201ENST00000384442 131 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 MIR223-201ENST00000385204 110 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 MIR550A3-201ENST00000390735 95 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 SAR1AP2-201ENST00000392696 594 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AL096829.1-201ENST00000413677 457 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RPL35AP3-201ENST00000414680 288 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 UBE2FP1-201ENST00000416536 447 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-CQ95604 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.38□□□□□ -1.39
HLA-CQ95604 C4BPAP2-201ENST00000428434 478 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-CQ95604 AL596266.1-201ENST00000448132 400 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 NDUFB1P2-201ENST00000449477 176 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RANP2-201ENST00000456833 229 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RN7SL870P-201ENST00000460111 296 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-CQ95604 AC005532.2-201ENST00000467154 373 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AC053481.1-201ENST00000467217 306 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AC008953.1-201ENST00000497334 318 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RNU6-27P-201ENST00000516146 107 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RNA5SP228-201ENST00000516232 133 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 RNU6-897P-201ENST00000517135 105 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 SNORA43.3-201ENST00000517240 103 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-CQ95604 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-CQ95604 IGBP1P1-201ENST00000554337 1009 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-CQ95604 AC090517.1-201ENST00000569307 266 ntBASIC6.38□□□□□ -1.39
HLA-CQ95604 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms