Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TOMM22P6-201ENST00000465035 409 ntBASIC1.56□□□□□ -2.16
UBR4Q5T4S7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC1.56□□□□□ -2.16
UBR4Q5T4S7 HMGB3P2-201ENST00000411913 584 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC126124.2-201ENST00000413542 321 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC003989.2-201ENST00000440224 169 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AL583843.1-201ENST00000456070 346 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 OR4G11P-201ENST00000492842 939 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 NIPA2P2-201ENST00000496376 1083 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 RN7SKP49-201ENST00000516675 260 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 MIR5047-201ENST00000579212 100 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 MTND4P26-201ENST00000415971 1359 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 RPL7P20-201ENST00000520308 745 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AL158032.1-201ENST00000605401 106 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 ZNF734P-201ENST00000419494 1534 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC008079.2-201ENST00000623543 20396 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AL591473.1-201ENST00000464297 313 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 SNORA31.21-201ENST00000517180 77 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC022069.1-201ENST00000582910 658 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 SNORD91B-202ENST00000608459 222 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AP000255.1-201ENST00000610276 676 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC243773.3-201ENST00000613270 256 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 FCF1P3-201ENST00000496394 590 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 GLYCAM1-201ENST00000546596 285 ntBASIC1.55□□□□□ -2.16
UBR4Q5T4S7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
UBR4Q5T4S7 RNU4-41P-201ENST00000364426 143 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 RPL23AP58-201ENST00000440453 469 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC108471.1-201ENST00000513977 287 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 SNORA70.19-201ENST00000516717 90 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 LRRC37A5P-203ENST00000580181 585 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 RNA5SP88-201ENST00000365560 109 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC245291.1-201ENST00000419501 328 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC006840.1-201ENST00000623069 542 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 RPS12P2-201ENST00000439728 269 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 RPS12P18-201ENST00000442381 270 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 SNX5P1-201ENST00000505757 1041 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC138938.1-201ENST00000515431 782 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AC096772.1-201ENST00000609146 564 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AL024474.1-201ENST00000404655 591 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 RN7SKP32-201ENST00000410167 303 ntBASIC1.54□□□□□ -2.16
UBR4Q5T4S7 AL354710.1-201ENST00000453641 246 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms