Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AL442639.1-201ENST00000625030 1899 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AC027514.1-201ENST00000588561 1603 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL445487.1-201ENST00000415694 1580 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SUMO3P55854 OR52B1P-201ENST00000316506 909 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 Y_RNA.516-201ENST00000384541 124 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL590762.2-201ENST00000395798 571 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AL133270.1-201ENST00000402635 279 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 RNU6-712P-201ENST00000410558 100 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.33□□□□□ -1.72
SUMO3P55854 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 RPS27P18-201ENST00000431701 247 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 OR2B8P-201ENST00000432841 938 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 RPL12P3-201ENST00000440080 396 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.33□□□□□ -1.72
SUMO3P55854 MTND1P1-201ENST00000445453 368 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.33□□□□□ -1.72
SUMO3P55854 AC091685.2-201ENST00000454924 864 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.33□□□□□ -1.72
SUMO3P55854 RN7SL610P-201ENST00000463845 291 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC063943.1-201ENST00000465434 453 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC006967.1-201ENST00000467608 589 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AC107401.1-201ENST00000503426 685 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 KCTD9P5-201ENST00000504141 1170 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 RNU6-1095P-201ENST00000516148 108 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 DEFB109D-201ENST00000529497 240 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.33□□□□□ -1.72
SUMO3P55854 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.33□□□□□ -1.72
SUMO3P55854 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.33□□□□□ -1.72
SUMO3P55854 MIR3118-1-201ENST00000581787 76 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL022154.1-201ENST00000604698 785 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 AL049539.1-201ENST00000611964 459 ntBASIC4.33□□□□□ -1.72
SUMO3P55854 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
SUMO3P55854 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SUMO3P55854 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SUMO3P55854 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 AL136164.3-201ENST00000624429 3978 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC025574.1-201ENST00000554784 1653 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 DHX40P1-201ENST00000588725 1412 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SUMO3P55854 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 RNU6-1078P-201ENST00000364522 103 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 U3.15-201ENST00000365398 212 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SUMO3P55854 RNA5SP87-201ENST00000384155 118 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 MIR550A3-201ENST00000390735 95 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 RNU11-4P-201ENST00000391149 133 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 ARL4AP5-201ENST00000404372 599 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 RN7SKP267-201ENST00000410381 285 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 HMGN1P24-201ENST00000412282 298 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AL591848.1-201ENST00000413092 322 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 RPL36AP10-201ENST00000421785 322 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.32□□□□□ -1.72
SUMO3P55854 BEND7P1-201ENST00000422058 457 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC016831.4-201ENST00000438302 307 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 NANOGNBP1-201ENST00000448444 480 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 RN7SL826P-201ENST00000479724 288 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 AC012170.1-201ENST00000495139 359 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC091868.1-201ENST00000508746 304 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 RN7SKP46-201ENST00000515942 234 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC103783.1-201ENST00000520506 373 ntBASIC4.32□□□□□ -1.72
SUMO3P55854 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SUMO3P55854 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.32□□□□□ -1.72
SUMO3P55854 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms