Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 HMGB1P15-201ENST00000453854 435 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 ARPC3P2-201ENST00000457786 533 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC090013.1-201ENST00000485147 480 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF4P48230 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 BNIP3P41-201ENST00000503774 571 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.72□□□□□ -1.65
TM4SF4P48230 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC024589.1-201ENST00000512207 263 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AL356596.1-201ENST00000624230 379 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TM4SF4P48230 AC100778.3-201ENST00000580060 1750 ntBASIC4.72□□□□□ -1.65
TM4SF4P48230 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF4P48230 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF4P48230 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.72□□□□□ -1.65
TM4SF4P48230 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.72□□□□□ -1.65
TM4SF4P48230 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF4P48230 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TM4SF4P48230 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
TM4SF4P48230 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
TM4SF4P48230 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TM4SF4P48230 SNORD66.1-201ENST00000391230 76 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 TPMTP2-201ENST00000414372 726 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC009518.2-201ENST00000418056 731 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF4P48230 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF4P48230 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 CYCSP32-201ENST00000440548 321 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 SNORD108-201ENST00000459332 71 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AC104563.1-201ENST00000476147 376 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AC106707.2-201ENST00000484182 374 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.71□□□□□ -1.66
TM4SF4P48230 RNU6-352P-201ENST00000516908 107 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AC068587.4-201ENST00000533893 186 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC091516.1-201ENST00000549191 703 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF4P48230 GTF2IP22-201ENST00000554443 182 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AL669831.4-202ENST00000590817 238 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 U3.45-201ENST00000607547 219 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AC024560.3-201ENST00000608482 349 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC006329.2-201ENST00000611491 394 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AL357080.1-201ENST00000617394 239 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.71□□□□□ -1.66
TM4SF4P48230 AC004009.2-201ENST00000623016 728 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.71□□□□□ -1.66
TM4SF4P48230 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.71□□□□□ -1.66
TM4SF4P48230 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TM4SF4P48230 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 MTCO1P12-201ENST00000414273 1543 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 AL022578.1-201ENST00000439330 1433 ntBASIC4.71□□□□□ -1.66
TM4SF4P48230 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TM4SF4P48230 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
TM4SF4P48230 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TM4SF4P48230 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF4P48230 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF4P48230 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.7□□□□□ -1.66
TM4SF4P48230 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
TM4SF4P48230 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF4P48230 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.7□□□□□ -1.66
TM4SF4P48230 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF4P48230 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TM4SF4P48230 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.7□□□□□ -1.66
TM4SF4P48230 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TM4SF4P48230 RNU6-28P-201ENST00000362378 107 ntBASIC4.7□□□□□ -1.66
TM4SF4P48230 RNU6-821P-201ENST00000390995 107 ntBASIC4.7□□□□□ -1.66
TM4SF4P48230 VN1R8P-201ENST00000407739 893 ntBASIC4.7□□□□□ -1.66
TM4SF4P48230 MIR1911-201ENST00000410783 80 ntBASIC4.7□□□□□ -1.66
TM4SF4P48230 HMGB1P11-201ENST00000413899 637 ntBASIC4.7□□□□□ -1.66
TM4SF4P48230 RPS29P4-201ENST00000414733 161 ntBASIC4.7□□□□□ -1.66
TM4SF4P48230 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.7□□□□□ -1.66
TM4SF4P48230 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.7□□□□□ -1.66
TM4SF4P48230 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms