Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC007256.1-201ENST00000392253 2765 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC1A1P43005 RPL23AP57-201ENST00000332361 466 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 SNORA62.3-201ENST00000365110 153 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 SNORA7.4-201ENST00000384249 137 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 RNU6-1151P-201ENST00000384684 107 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 MIR607-201ENST00000385241 96 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 RPL7P25-201ENST00000404151 721 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 MIR1250-201ENST00000408098 113 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 RNU4-47P-201ENST00000410876 114 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AL159987.2-201ENST00000432754 307 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 RPL21P112-201ENST00000434403 463 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC109925.1-201ENST00000478069 331 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC006483.1-201ENST00000487308 313 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC010468.3-201ENST00000508225 458 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC1A1P43005 MTCYBP41-201ENST00000528913 1123 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC1A1P43005 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC104229.1-201ENST00000561364 255 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC055876.1-202ENST00000567053 138 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC106734.1-201ENST00000568646 663 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 MAGOH2P-202ENST00000584384 429 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 OR4G1P-201ENST00000588632 938 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC011468.4-201ENST00000603942 409 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 AC004832.5-201ENST00000608677 401 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC1A1P43005 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC1A1P43005 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SLC1A1P43005 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.25□□□□□ -1.89
SLC1A1P43005 AL359893.1-201ENST00000447628 1580 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SLC1A1P43005 ZNF37BP-203ENST00000452306 1352 ntBASIC3.25□□□□□ -1.89
SLC1A1P43005 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
SLC1A1P43005 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AL355578.1-201ENST00000607405 1328 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 MFSD8-213ENST00000641134 1327 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC1A1P43005 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC1A1P43005 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SLC1A1P43005 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC1A1P43005 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC1A1P43005 RNU6-600P-201ENST00000362524 99 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 RNA5SP295-201ENST00000362655 121 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 SNORA7.2-201ENST00000364446 145 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 SNORD15B-201ENST00000384714 146 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 MIR134-201ENST00000385258 73 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 EIF5P1-201ENST00000400019 1231 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 RPL31P2-201ENST00000413849 377 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 PAICSP7-201ENST00000419829 962 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 RPS26P56-201ENST00000444468 240 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 BX248409.1-201ENST00000455497 255 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 RPS15AP1-201ENST00000457423 391 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 FTH1P2-201ENST00000466086 412 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC1A1P43005 RPL23AP55-201ENST00000498163 452 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 SETP12-201ENST00000514068 805 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 RNU6-488P-201ENST00000515918 99 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 RN7SKP244-201ENST00000516513 307 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 LINC00557-201ENST00000563184 1279 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC034105.4-201ENST00000568304 277 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
SLC1A1P43005 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 AC090425.2-201ENST00000608818 501 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 AC100793.4-201ENST00000613683 429 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SLC1A1P43005 MTND5P19-201ENST00000424872 1794 ntBASIC3.24□□□□□ -1.89
SLC1A1P43005 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SLC1A1P43005 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms