Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
HOXD11P31277 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 PRDM9-201ENST00000296682 3691 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 AP001541.1-201ENST00000623322 1904 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HOXD11P31277 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXD11P31277 RPL12P39-201ENST00000455456 496 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 RPL3P10-201ENST00000476002 1164 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 RN7SL502P-201ENST00000481857 290 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 RN7SL153P-201ENST00000486501 292 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 RN7SL568P-201ENST00000493069 298 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC8.02□□□□□ -1.13
HOXD11P31277 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.02□□□□□ -1.13
HOXD11P31277 LINC00933-203ENST00000559812 219 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 MIR6806-201ENST00000622141 64 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 OR2AH1P-202ENST00000641232 2744 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 FAM91A3P-201ENST00000456826 2544 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HOXD11P31277 MAPK10-347ENST00000641762 2856 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC8.02□□□□□ -1.13
HOXD11P31277 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.02□□□□□ -1.13
HOXD11P31277 ZNF252P-208ENST00000592792 2485 ntBASIC8.02□□□□□ -1.13
HOXD11P31277 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 AL136981.1-203ENST00000451452 3844 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
HOXD11P31277 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 AC004014.2-201ENST00000623718 5122 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 AC092681.1-201ENST00000297369 291 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 SNORA4.2-201ENST00000365313 147 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 U3.18-201ENST00000390880 216 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 AC002075.2-201ENST00000425207 252 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 TOMM22P2-201ENST00000430735 237 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 FTH1P10-202ENST00000430907 550 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 AC099344.1-201ENST00000433548 492 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.01□□□□□ -1.13
HOXD11P31277 AC073465.2-201ENST00000440938 498 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC8.01□□□□□ -1.13
HOXD11P31277 RN7SL57P-201ENST00000493687 290 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 IGHVIII-82-201ENST00000522058 250 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 AC084364.2-201ENST00000546924 395 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.01□□□□□ -1.13
HOXD11P31277 SNORD84-203ENST00000584275 78 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 AL049861.1-201ENST00000603130 150 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 MIR6071-201ENST00000616741 78 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 U73479.1-201ENST00000618062 168 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 U6.115-201ENST00000636045 103 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 KRT7-214ENST00000638501 398 ntTSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
HOXD11P31277 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.01□□□□□ -1.13
HOXD11P31277 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 NLRP3-201ENST00000336119 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 AC073073.2-201ENST00000609827 2578 ntBASIC8.01□□□□□ -1.13
HOXD11P31277 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HOXD11P31277 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD11P31277 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
HOXD11P31277 PTAFR-202ENST00000373857 4491 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD11P31277 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD11P31277 AC126755.2-208ENST00000327792 462 ntBASIC8□□□□□ -1.13
HOXD11P31277 AC138969.1-213ENST00000331436 462 ntBASIC8□□□□□ -1.13
HOXD11P31277 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
HOXD11P31277 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8□□□□□ -1.13
HOXD11P31277 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC8□□□□□ -1.13
HOXD11P31277 TIMM8BP2-201ENST00000445940 251 ntBASIC8□□□□□ -1.13
HOXD11P31277 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms