Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
XPAP23025 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.85□□□□□ -1.63
XPAP23025 AC000123.3-201ENST00000624029 4975 ntBASIC4.85□□□□□ -1.63
XPAP23025 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
XPAP23025 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 MAPK10-286ENST00000641208 8747 ntBASIC4.84□□□□□ -1.63
XPAP23025 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 ELL2P4-201ENST00000446870 1376 ntBASIC4.84□□□□□ -1.63
XPAP23025 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
XPAP23025 OR5J1P-201ENST00000313544 939 ntBASIC4.84□□□□□ -1.63
XPAP23025 OR52B1P-201ENST00000316506 909 ntBASIC4.84□□□□□ -1.63
XPAP23025 Y_RNA.9-201ENST00000362354 101 ntBASIC4.84□□□□□ -1.63
XPAP23025 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 Y_RNA.409-201ENST00000383990 98 ntBASIC4.84□□□□□ -1.63
XPAP23025 U3.30-201ENST00000391308 210 ntBASIC4.84□□□□□ -1.63
XPAP23025 RAP1BP3-201ENST00000407180 549 ntBASIC4.84□□□□□ -1.63
XPAP23025 MIR1277-201ENST00000408536 78 ntBASIC4.84□□□□□ -1.63
XPAP23025 RNU4-55P-201ENST00000410731 137 ntBASIC4.84□□□□□ -1.63
XPAP23025 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.84□□□□□ -1.63
XPAP23025 AC104333.2-201ENST00000422630 192 ntBASIC4.84□□□□□ -1.63
XPAP23025 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.84□□□□□ -1.63
XPAP23025 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.84□□□□□ -1.63
XPAP23025 RPL31P35-201ENST00000431058 377 ntBASIC4.84□□□□□ -1.63
XPAP23025 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.84□□□□□ -1.63
XPAP23025 HMGB1P31-201ENST00000437242 427 ntBASIC4.84□□□□□ -1.63
XPAP23025 AL356981.1-201ENST00000454879 684 ntBASIC4.84□□□□□ -1.63
XPAP23025 RBM43P1-201ENST00000476891 1081 ntBASIC4.84□□□□□ -1.63
XPAP23025 RN7SL558P-201ENST00000497468 299 ntBASIC4.84□□□□□ -1.63
XPAP23025 KCTD9P5-201ENST00000504141 1170 ntBASIC4.84□□□□□ -1.63
XPAP23025 AC093767.1-201ENST00000504523 156 ntBASIC4.84□□□□□ -1.63
XPAP23025 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.84□□□□□ -1.63
XPAP23025 ARL4AP2-201ENST00000507378 601 ntBASIC4.84□□□□□ -1.63
XPAP23025 AC108475.1-201ENST00000507880 950 ntBASIC4.84□□□□□ -1.63
XPAP23025 AC016065.2-201ENST00000514530 444 ntBASIC4.84□□□□□ -1.63
XPAP23025 RNU6-714P-201ENST00000516963 103 ntBASIC4.84□□□□□ -1.63
XPAP23025 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.84□□□□□ -1.63
XPAP23025 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.84□□□□□ -1.63
XPAP23025 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.84□□□□□ -1.63
XPAP23025 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.84□□□□□ -1.63
XPAP23025 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.84□□□□□ -1.63
XPAP23025 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.84□□□□□ -1.63
XPAP23025 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.84□□□□□ -1.63
XPAP23025 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.84□□□□□ -1.63
XPAP23025 AL359999.1-201ENST00000604513 294 ntBASIC4.84□□□□□ -1.63
XPAP23025 AC012409.3-201ENST00000611343 981 ntBASIC4.84□□□□□ -1.63
XPAP23025 AC009318.4-201ENST00000620496 486 ntBASIC4.84□□□□□ -1.63
XPAP23025 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.84□□□□□ -1.63
XPAP23025 LRRC77P-213ENST00000637727 880 ntBASIC4.84□□□□□ -1.63
XPAP23025 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
XPAP23025 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
XPAP23025 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.84□□□□□ -1.63
XPAP23025 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
XPAP23025 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
XPAP23025 AC007390.2-201ENST00000606229 3803 ntBASIC4.84□□□□□ -1.64
XPAP23025 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.84□□□□□ -1.64
XPAP23025 ZNF33CP-201ENST00000432492 2030 ntBASIC4.84□□□□□ -1.64
XPAP23025 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
XPAP23025 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
XPAP23025 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
XPAP23025 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
XPAP23025 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.83□□□□□ -1.64
XPAP23025 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
XPAP23025 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 RN7SKP100-201ENST00000411258 284 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC078974.1-201ENST00000411597 223 ntBASIC4.83□□□□□ -1.64
XPAP23025 NUP35P2-201ENST00000416748 943 ntBASIC4.83□□□□□ -1.64
XPAP23025 CCDC58P2-201ENST00000417131 366 ntBASIC4.83□□□□□ -1.64
XPAP23025 BX510359.2-201ENST00000417920 305 ntBASIC4.83□□□□□ -1.64
XPAP23025 AL109913.1-201ENST00000421173 514 ntBASIC4.83□□□□□ -1.64
XPAP23025 ARPC3P1-201ENST00000437218 533 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC016831.4-201ENST00000438302 307 ntBASIC4.83□□□□□ -1.64
XPAP23025 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
XPAP23025 RPS20P21-201ENST00000466859 343 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.83□□□□□ -1.64
XPAP23025 AC007686.1-201ENST00000488511 463 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC013356.1-201ENST00000489027 564 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.83□□□□□ -1.64
XPAP23025 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
XPAP23025 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.83□□□□□ -1.64
XPAP23025 SAP18P1-201ENST00000512058 390 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.83□□□□□ -1.64
XPAP23025 AC093677.1-201ENST00000514414 678 ntBASIC4.83□□□□□ -1.64
XPAP23025 Y_RNA.672-201ENST00000516289 104 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.83□□□□□ -1.64
XPAP23025 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.83□□□□□ -1.64
XPAP23025 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
XPAP23025 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.83□□□□□ -1.64
XPAP23025 MIR3682-201ENST00000581338 84 ntBASIC4.83□□□□□ -1.64
XPAP23025 AC006504.3-201ENST00000586818 523 ntBASIC4.83□□□□□ -1.64
XPAP23025 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.83□□□□□ -1.64
XPAP23025 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms