Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC105402.2-201ENST00000438503 358 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.99□□□□□ -1.61
COL6A2P12110 RPS29P9-201ENST00000440360 171 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 RNU6-261P-201ENST00000459506 102 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 RPS20P20-201ENST00000460498 340 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.99□□□□□ -1.61
COL6A2P12110 AC090686.1-201ENST00000481577 749 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.99□□□□□ -1.61
COL6A2P12110 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.99□□□□□ -1.61
COL6A2P12110 AC022616.3-201ENST00000523940 148 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 BRD9P1-201ENST00000529855 560 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 AC024940.3-201ENST00000538551 316 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.99□□□□□ -1.61
COL6A2P12110 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.99□□□□□ -1.61
COL6A2P12110 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.99□□□□□ -1.61
COL6A2P12110 AC025449.1-201ENST00000603896 529 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 MIR8069-1-201ENST00000616627 86 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.99□□□□□ -1.61
COL6A2P12110 MIR8069-2-201ENST00000621412 86 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.99□□□□□ -1.61
COL6A2P12110 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL6A2P12110 AL451142.2-201ENST00000429076 2090 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
COL6A2P12110 OR51H2P-202ENST00000641424 3046 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 RPS4XP5-202ENST00000449995 1334 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.98□□□□□ -1.61
COL6A2P12110 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC007529.1-201ENST00000418574 2178 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL6A2P12110 Y_RNA.234-201ENST00000364409 97 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 RPL36AP10-201ENST00000421785 322 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AL592293.2-201ENST00000422292 996 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.98□□□□□ -1.61
COL6A2P12110 EZH2P1-201ENST00000431167 291 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AC119618.1-201ENST00000434191 222 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.98□□□□□ -1.61
COL6A2P12110 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.98□□□□□ -1.61
COL6A2P12110 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 snoU13.8-201ENST00000458890 104 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 RPS17P2-201ENST00000461663 408 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 RN7SL517P-201ENST00000462240 305 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC111000.3-201ENST00000508057 576 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 RN7SKP46-201ENST00000515942 234 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC090572.1-201ENST00000519251 160 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 IGLV2-28-201ENST00000520681 304 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC005868.1-201ENST00000536421 331 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 AC124068.1-201ENST00000563131 678 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.98□□□□□ -1.61
COL6A2P12110 MIR3146-201ENST00000580367 79 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 AL589674.2-201ENST00000604304 337 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 RMST_3.1-201ENST00000611651 109 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 AL512624.1-201ENST00000613638 469 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 AL356585.4-201ENST00000623078 1229 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 BMS1P21-201ENST00000634565 365 ntBASIC4.98□□□□□ -1.61
COL6A2P12110 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL6A2P12110 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
COL6A2P12110 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL6A2P12110 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 MAPK10-304ENST00000641341 3984 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 AL031119.1-201ENST00000404707 1879 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.97□□□□□ -1.61
COL6A2P12110 Y_RNA.86-201ENST00000363020 111 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
COL6A2P12110 RNU1-130P-201ENST00000363930 160 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 259.1 ms