Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL353743.1-202ENST00000431724 1695 ntBASIC2.59□□□□□ -2
HLA-DQA1P01909 AC118273.1-201ENST00000525324 3006 ntBASIC2.59□□□□□ -2
HLA-DQA1P01909 AC010733.2-201ENST00000589496 5702 ntBASIC2.59□□□□□ -2
HLA-DQA1P01909 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.59□□□□□ -2
HLA-DQA1P01909 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.58□□□□□ -2
HLA-DQA1P01909 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 OR4A15-201ENST00000314706 1035 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RNVU1-3-201ENST00000364313 161 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 MIR591-201ENST00000385290 95 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 MTND4LP20-201ENST00000402379 270 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RPL7P27-201ENST00000403775 720 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RN7SKP263-201ENST00000411194 309 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 FNDC3CP-201ENST00000420795 1155 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 OR8F1P-201ENST00000425243 930 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 C1DP1-201ENST00000426049 402 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC093151.1-201ENST00000427711 313 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 OR4C10P-201ENST00000434991 931 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 RPS29P7-201ENST00000439662 171 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RPL21P89-201ENST00000444021 467 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 UQCRHP3-201ENST00000451503 251 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AC097262.1-201ENST00000452559 548 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC093663.1-201ENST00000497190 394 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC010265.1-201ENST00000513509 211 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RN7SKP244-201ENST00000516513 307 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RN7SKP116-201ENST00000516902 319 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 OR4R3P-201ENST00000525084 838 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 LSM6P2-201ENST00000552208 177 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC007224.1-201ENST00000564410 144 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AL445435.1-201ENST00000604232 665 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 AP003973.1-201ENST00000604639 691 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AL365400.2-201ENST00000605604 902 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AC018754.1-201ENST00000607486 925 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC005156.1-201ENST00000613371 573 ntBASIC2.58□□□□□ -2
HLA-DQA1P01909 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.58□□□□□ -2
HLA-DQA1P01909 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DQA1P01909 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DQA1P01909 MAPK10-362ENST00000641864 4484 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DQA1P01909 SNORA31-201ENST00000362607 130 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RNU6-730P-201ENST00000383954 104 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RNU6-339P-201ENST00000384310 107 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DQA1P01909 RNA5SP344-201ENST00000411081 104 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RPS7P9-201ENST00000414704 586 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 KRR1P1-201ENST00000419430 803 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC004975.1-201ENST00000428733 208 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AC127537.2-201ENST00000439258 465 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC239367.2-201ENST00000447309 705 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 Z99127.3-201ENST00000448158 395 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DQA1P01909 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DQA1P01909 MTCO3P2-201ENST00000457365 171 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RN7SL75P-201ENST00000461926 281 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RN7SL132P-201ENST00000478131 296 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC108860.1-201ENST00000484521 383 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RN7SL323P-201ENST00000494712 295 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AL139099.1-201ENST00000497398 403 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 RPL23AP55-201ENST00000498163 452 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 AC008427.1-201ENST00000503102 655 ntBASIC2.57□□□□□ -2
HLA-DQA1P01909 OR5H5P-201ENST00000503164 928 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms