Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HIGD1AP5-201ENST00000529959 259 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 CYCSP28-201ENST00000534284 321 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.79□□□□□ -1.64
CNOT4O95628 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 HSPE1P3-201ENST00000559254 309 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC009117.1-201ENST00000563948 554 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.79□□□□□ -1.64
CNOT4O95628 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC099489.2-201ENST00000574976 260 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 RN7SL708P-201ENST00000580952 299 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 RN7SL356P-201ENST00000582228 248 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC005858.4-201ENST00000623191 700 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.79□□□□□ -1.64
CNOT4O95628 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC097504.1-201ENST00000515103 2415 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC008079.2-201ENST00000623543 20396 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CNOT4O95628 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CNOT4O95628 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.78□□□□□ -1.64
CNOT4O95628 RNU6-359P-201ENST00000365466 108 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 SNORA69-201ENST00000383895 132 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CNOT4O95628 RNU1-77P-201ENST00000390868 162 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC068050.1-201ENST00000394891 380 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AL122016.1-201ENST00000403365 367 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 RN7SKP32-201ENST00000410167 303 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.78□□□□□ -1.64
CNOT4O95628 TPMTP2-201ENST00000414372 726 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AL353729.1-201ENST00000425044 720 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AL590762.4-201ENST00000425885 253 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC018644.1-201ENST00000429934 551 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 AL606489.2-201ENST00000433886 234 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 GSTM5P1-201ENST00000434751 660 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.78□□□□□ -1.64
CNOT4O95628 AC073465.2-201ENST00000440938 498 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 H2AFZP6-201ENST00000444403 394 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 MRPL50P4-201ENST00000446432 475 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 RPL7P12-201ENST00000446719 750 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 RPL7P19-201ENST00000469948 618 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 RPL31P50-201ENST00000471002 296 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 RPS24P16-201ENST00000497294 392 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 SNORA19.2-201ENST00000516013 114 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 COX6CP8-201ENST00000522620 226 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.78□□□□□ -1.64
CNOT4O95628 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.78□□□□□ -1.64
CNOT4O95628 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.78□□□□□ -1.64
CNOT4O95628 AC126177.5-201ENST00000549599 178 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.78□□□□□ -1.64
CNOT4O95628 MIR3671-201ENST00000580455 88 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 MAGOH2P-202ENST00000584384 429 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 MIR7853-201ENST00000584820 132 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 BNIP3P22-201ENST00000593399 556 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 uc_338.5-201ENST00000611839 155 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC078899.5-201ENST00000612475 178 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 RMST_7.1-201ENST00000621935 268 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC100810.6-201ENST00000638068 285 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 AC073869.8-201ENST00000641806 335 ntBASIC4.78□□□□□ -1.64
CNOT4O95628 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.78□□□□□ -1.64
CNOT4O95628 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CNOT4O95628 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CNOT4O95628 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.77□□□□□ -1.65
CNOT4O95628 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CNOT4O95628 MIR133B-201ENST00000362210 119 ntBASIC4.77□□□□□ -1.65
CNOT4O95628 Y_RNA.138-201ENST00000363462 102 ntBASIC4.77□□□□□ -1.65
CNOT4O95628 SNORA67-201ENST00000384423 137 ntBASIC4.77□□□□□ -1.65
CNOT4O95628 MIR765-201ENST00000390226 114 ntBASIC4.77□□□□□ -1.65
CNOT4O95628 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CNOT4O95628 DBIP1-201ENST00000401435 260 ntBASIC4.77□□□□□ -1.65
CNOT4O95628 DHFRP6-201ENST00000401776 268 ntBASIC4.77□□□□□ -1.65
CNOT4O95628 RNU6-1068P-201ENST00000410958 103 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms