Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 MIR3605-201ENST00000583214 100 ntBASIC4.1□□□□□ -1.75
PCF11O94913 AC007621.1-201ENST00000604544 437 ntBASIC4.1□□□□□ -1.75
PCF11O94913 NEAT1-202ENST00000501122 22743 ntBASIC4.1□□□□□ -1.75
PCF11O94913 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCF11O94913 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PCF11O94913 RNU1-87P-201ENST00000363727 170 ntBASIC4.1□□□□□ -1.75
PCF11O94913 SNORA36C-201ENST00000384289 132 ntBASIC4.1□□□□□ -1.75
PCF11O94913 MIR489-201ENST00000384923 84 ntBASIC4.1□□□□□ -1.75
PCF11O94913 RNU4-53P-201ENST00000410828 140 ntBASIC4.1□□□□□ -1.75
PCF11O94913 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.1□□□□□ -1.75
PCF11O94913 AC092013.1-201ENST00000438795 332 ntBASIC4.1□□□□□ -1.75
PCF11O94913 HMGB1P25-201ENST00000468402 607 ntBASIC4.1□□□□□ -1.75
PCF11O94913 RN7SL499P-201ENST00000481141 276 ntBASIC4.1□□□□□ -1.75
PCF11O94913 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.1□□□□□ -1.75
PCF11O94913 AC023813.4-201ENST00000607580 580 ntBASIC4.1□□□□□ -1.75
PCF11O94913 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PCF11O94913 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCF11O94913 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCF11O94913 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCF11O94913 AC138915.3-201ENST00000562908 1389 ntBASIC4.09□□□□□ -1.75
PCF11O94913 AC093908.1-201ENST00000623125 8092 ntBASIC4.09□□□□□ -1.75
PCF11O94913 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.09□□□□□ -1.75
PCF11O94913 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.09□□□□□ -1.75
PCF11O94913 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.09□□□□□ -1.75
PCF11O94913 RPL23AP70-201ENST00000483361 460 ntBASIC4.09□□□□□ -1.75
PCF11O94913 AC106872.2-201ENST00000494303 480 ntBASIC4.09□□□□□ -1.75
PCF11O94913 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCF11O94913 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.09□□□□□ -1.75
PCF11O94913 UBTFL10-201ENST00000528532 562 ntBASIC4.09□□□□□ -1.75
PCF11O94913 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.09□□□□□ -1.75
PCF11O94913 AP000942.3-201ENST00000603702 160 ntBASIC4.09□□□□□ -1.75
PCF11O94913 NF1P10-201ENST00000613227 742 ntBASIC4.09□□□□□ -1.75
PCF11O94913 AC010809.3-201ENST00000621310 641 ntBASIC4.09□□□□□ -1.75
PCF11O94913 MTND5P19-201ENST00000424872 1794 ntBASIC4.09□□□□□ -1.76
PCF11O94913 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.09□□□□□ -1.76
PCF11O94913 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCF11O94913 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCF11O94913 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCF11O94913 RPL5P19-201ENST00000404228 893 ntBASIC4.08□□□□□ -1.76
PCF11O94913 RPL23AP14-201ENST00000468281 468 ntBASIC4.08□□□□□ -1.76
PCF11O94913 AC096725.1-201ENST00000514266 313 ntBASIC4.08□□□□□ -1.76
PCF11O94913 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.08□□□□□ -1.76
PCF11O94913 AP000867.2-201ENST00000532468 320 ntBASIC4.08□□□□□ -1.76
PCF11O94913 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.08□□□□□ -1.76
PCF11O94913 MIR4498-201ENST00000577599 66 ntBASIC4.08□□□□□ -1.76
PCF11O94913 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCF11O94913 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCF11O94913 AP000526.1-201ENST00000603308 1388 ntBASIC4.08□□□□□ -1.76
PCF11O94913 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCF11O94913 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCF11O94913 AC092881.1-201ENST00000638218 2733 ntBASIC4.08□□□□□ -1.76
PCF11O94913 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.07□□□□□ -1.76
PCF11O94913 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCF11O94913 AL590399.6-201ENST00000446396 307 ntBASIC4.07□□□□□ -1.76
PCF11O94913 RPL7P20-201ENST00000520308 745 ntBASIC4.07□□□□□ -1.76
PCF11O94913 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.07□□□□□ -1.76
PCF11O94913 MIR4644-201ENST00000579929 84 ntBASIC4.07□□□□□ -1.76
PCF11O94913 AC008277.2-201ENST00000605196 797 ntBASIC4.07□□□□□ -1.76
PCF11O94913 AC009570.1-201ENST00000609599 745 ntBASIC4.07□□□□□ -1.76
PCF11O94913 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCF11O94913 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.07□□□□□ -1.76
PCF11O94913 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCF11O94913 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
PCF11O94913 AC026523.2-201ENST00000625039 7739 ntBASIC4.07□□□□□ -1.76
PCF11O94913 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.07□□□□□ -1.76
PCF11O94913 AC008264.2-201ENST00000610193 3731 ntBASIC4.07□□□□□ -1.76
PCF11O94913 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCF11O94913 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.07□□□□□ -1.76
PCF11O94913 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.07□□□□□ -1.76
PCF11O94913 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCF11O94913 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCF11O94913 MIR7-2-201ENST00000384970 110 ntBASIC4.06□□□□□ -1.76
PCF11O94913 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PCF11O94913 AL590004.2-201ENST00000404787 371 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC080125.1-201ENST00000414888 684 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.06□□□□□ -1.76
PCF11O94913 AL356320.1-201ENST00000429616 163 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AL592437.1-201ENST00000443781 492 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.06□□□□□ -1.76
PCF11O94913 AC022431.1-201ENST00000450941 438 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC016687.1-201ENST00000482574 353 ntBASIC4.06□□□□□ -1.76
PCF11O94913 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.06□□□□□ -1.76
PCF11O94913 KCTD9P5-201ENST00000504141 1170 ntBASIC4.06□□□□□ -1.76
PCF11O94913 NPM1P35-201ENST00000533043 868 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC128657.1-201ENST00000549459 145 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AL121839.1-201ENST00000556233 1185 ntBASIC4.06□□□□□ -1.76
PCF11O94913 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCF11O94913 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCF11O94913 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCF11O94913 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
PCF11O94913 Y_RNA.355-201ENST00000365462 98 ntBASIC4.06□□□□□ -1.76
PCF11O94913 RPL23AP36-201ENST00000413895 458 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AL353705.4-201ENST00000449661 238 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC008280.2-201ENST00000455473 307 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AP000926.3-201ENST00000497201 299 ntBASIC4.06□□□□□ -1.76
PCF11O94913 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.06□□□□□ -1.76
PCF11O94913 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PCF11O94913 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.06□□□□□ -1.76
PCF11O94913 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.06□□□□□ -1.76
PCF11O94913 AC103810.6-201ENST00000606708 136 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms