Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AP001148.1-201ENST00000624124 2359 ntBASIC3.42□□□□□ -1.86
LCMT2O60294 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LCMT2O60294 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LCMT2O60294 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
LCMT2O60294 RIOK3P1-201ENST00000418778 1528 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 ANKRD36P1-201ENST00000344424 659 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.41□□□□□ -1.86
LCMT2O60294 MTCO1P56-201ENST00000401674 224 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 MTCO3P31-201ENST00000405526 789 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 U3.39-201ENST00000408569 239 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 RNA5SP56-201ENST00000410277 118 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 RNU2-71P-201ENST00000411395 189 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 OSTCP5-201ENST00000425293 453 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 AL590103.1-201ENST00000434488 307 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 HMGB1P12-201ENST00000438594 598 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 TXNP1-201ENST00000441872 371 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 GAPDHP39-201ENST00000481866 979 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 RPS3AP50-201ENST00000487064 803 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 AC113420.1-201ENST00000507903 571 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AC048346.1-201ENST00000510247 144 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.41□□□□□ -1.86
LCMT2O60294 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.41□□□□□ -1.86
LCMT2O60294 IGKV2-23-201ENST00000518729 323 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 AP001207.1-201ENST00000524051 481 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 DEFB130C-202ENST00000530001 230 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.41□□□□□ -1.86
LCMT2O60294 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.41□□□□□ -1.86
LCMT2O60294 AL669831.4-202ENST00000590817 238 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 AC006023.2-201ENST00000609916 167 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AC105227.2-201ENST00000615075 605 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.41□□□□□ -1.86
LCMT2O60294 CYCSP41-201ENST00000616920 296 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AC006133.1-201ENST00000617106 264 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LCMT2O60294 AC098679.5-201ENST00000624394 571 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AP003485.1-201ENST00000625093 753 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 U6.98-201ENST00000637157 84 ntBASIC3.41□□□□□ -1.86
LCMT2O60294 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.41□□□□□ -1.86
LCMT2O60294 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LCMT2O60294 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LCMT2O60294 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LCMT2O60294 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LCMT2O60294 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LCMT2O60294 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LCMT2O60294 RNA5SP235-201ENST00000365411 114 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 RNU6-339P-201ENST00000384310 107 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 RNU6-921P-201ENST00000384361 107 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 SNORD116-23-201ENST00000384645 92 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 MIR649-201ENST00000384843 97 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 RNU6-328P-201ENST00000390887 106 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 Y_RNA.578-201ENST00000390903 88 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 VN1R51P-201ENST00000411675 945 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 HSFY1P1-201ENST00000423928 1178 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 MTCO2P23-201ENST00000425216 680 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC006989.1-201ENST00000427212 131 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 AC091286.1-201ENST00000431233 461 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 Z95327.1-201ENST00000446082 482 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 EXOSC3P1-201ENST00000448649 500 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 HMGN2P16-201ENST00000456802 261 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LCMT2O60294 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LCMT2O60294 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 RN7SKP13-201ENST00000515933 244 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 RNU6-885P-201ENST00000516607 104 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.4□□□□□ -1.87
LCMT2O60294 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms