Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 RNU6-1293P-201ENST00000384077 107 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AL645927.1-201ENST00000396783 406 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RNU2-28P-201ENST00000410457 189 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC008280.1-201ENST00000418851 412 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AL513174.1-201ENST00000423182 629 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC234779.1-201ENST00000425910 285 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RPL21P91-201ENST00000429231 479 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RPL23AP25-201ENST00000430973 463 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 PSMD10P3-201ENST00000437000 448 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 Z99127.3-201ENST00000448158 395 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RPL39P6-201ENST00000448289 150 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 ISCUP1-201ENST00000454451 448 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RPL31P58-201ENST00000469001 379 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RPS3AP17-201ENST00000472594 777 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RPL23AP65-201ENST00000475608 468 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC108078.1-201ENST00000508073 725 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AF131216.2-201ENST00000512316 564 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC074344.1-201ENST00000512823 224 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-528P-201ENST00000516926 100 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 MTCO2P4-201ENST00000517968 247 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC022878.1-201ENST00000530684 149 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC013828.2-201ENST00000532487 235 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC068587.4-201ENST00000533893 186 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 OR1F2P-201ENST00000570470 933 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 MIR544B-201ENST00000582372 78 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 SNORD39.3-201ENST00000584451 71 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 BNIP3P8-201ENST00000597863 560 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC112191.3-201ENST00000604371 277 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AP000860.1-201ENST00000605250 559 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC133644.2-201ENST00000608142 540 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC025253.1-201ENST00000613623 543 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AP001506.1-201ENST00000615444 211 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 MIR6853-201ENST00000619642 74 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-156P-201ENST00000621869 107 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 AC099654.14-201ENST00000638599 341 ntBASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
SH3BP4Q9P0V3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 RNA5SP28-201ENST00000363841 119 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 RNU6-444P-201ENST00000383988 108 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 MIR708-201ENST00000390708 88 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 DSTNP4-201ENST00000399472 474 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AL121972.1-201ENST00000402023 252 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AL645733.1-201ENST00000402250 217 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 LAP3P1-201ENST00000403648 294 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 RNU2-21P-201ENST00000410368 188 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 RPS3AP3-201ENST00000411933 242 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 BX510359.2-201ENST00000417920 305 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 MTCYBP24-201ENST00000420387 1106 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 PDSS1P1-201ENST00000422953 1114 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AL445669.1-201ENST00000426743 755 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 HMGB1P31-201ENST00000437242 427 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AC005154.2-201ENST00000438110 379 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 LSM1P1-201ENST00000438629 273 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AL662791.1-201ENST00000441992 928 ntBASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.35□□□□□ -1.71
SH3BP4Q9P0V3 FGF7P3-201ENST00000454645 303 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms