Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ARL2BPP6-201ENST00000512757 439 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RNU2-46P-201ENST00000517038 113 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AL157394.1-201ENST00000562983 1224 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AC234771.5-201ENST00000600161 514 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 LINC01109-201ENST00000603837 3081 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AL121932.1-201ENST00000605542 214 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 MIR6864-201ENST00000617935 70 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 PISRT1-201ENST00000626175 531 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 TLK1P1-201ENST00000456760 2440 ntBASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
AMBRA1Q9C0C7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RNU4-44P-201ENST00000363050 141 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 U8.3-201ENST00000363321 132 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RNU6-1243P-201ENST00000364028 107 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 Y_RNA.372-201ENST00000365599 102 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RPS20P2-201ENST00000402520 389 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AL024474.1-201ENST00000404655 591 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 CIR1P3-201ENST00000405137 479 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 VDAC1P9-201ENST00000412766 841 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 COX6CP15-201ENST00000426313 211 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC093414.1-201ENST00000434712 514 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC105402.2-201ENST00000438503 358 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RPL17P49-201ENST00000443728 411 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC073587.1-201ENST00000447093 876 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 snoU13.7-201ENST00000459220 104 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 RPL7AP28-201ENST00000464513 571 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC092989.1-201ENST00000481235 277 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC012170.1-201ENST00000495139 359 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC006390.1-201ENST00000508068 283 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AP003122.4-201ENST00000530980 758 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AP005205.1-201ENST00000563503 508 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 CKS1BP3-201ENST00000600888 237 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC092954.2-201ENST00000609103 430 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 CYP3A51P-201ENST00000633513 256 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 FAM157B-203ENST00000639350 358 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC095050.2-201ENST00000510748 1458 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC130650.2-201ENST00000618736 2403 ntBASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
AMBRA1Q9C0C7 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 AC139713.2-215ENST00000641428 5037 ntBASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
AMBRA1Q9C0C7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 RNA5SP28-201ENST00000363841 119 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 MTCO3P40-201ENST00000392516 676 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 RAP1BP3-201ENST00000407180 549 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 RPL31P52-201ENST00000407532 367 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC069218.2-201ENST00000411665 344 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AC073136.2-201ENST00000417282 849 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 PIGFP2-201ENST00000421400 651 ntBASIC4.4□□□□□ -1.71
AMBRA1Q9C0C7 PDSS1P1-201ENST00000422953 1114 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms