Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC008033.1-201ENST00000216407 1162 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL121657.1-201ENST00000327215 531 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 Y_RNA.51-201ENST00000362725 102 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RNU6-97P-201ENST00000363387 104 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 Y_RNA.201-201ENST00000364052 96 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RNU6-853P-201ENST00000364306 107 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RNU6-1207P-201ENST00000384343 107 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RN7SKP167-201ENST00000411047 285 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RN7SKP142-201ENST00000411236 328 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RPL36AP36-201ENST00000418616 301 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC004552.1-201ENST00000419089 348 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL645608.4-201ENST00000423619 154 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 OR2B7P-201ENST00000429302 934 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 HLA-N-201ENST00000437516 135 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC016831.4-201ENST00000438302 307 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC073264.2-201ENST00000448886 166 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 MTND2P28-201ENST00000457540 1044 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 HMGB1P25-201ENST00000468402 607 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RPS26P3-201ENST00000470205 348 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 ST13P14-201ENST00000474095 734 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AP000797.1-201ENST00000478870 387 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC090543.2-201ENST00000483963 348 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC004057.1-201ENST00000485827 348 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC116347.2-201ENST00000514912 523 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RNU6-714P-201ENST00000516963 103 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 IFITM8P-201ENST00000522529 394 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 MIR4330-201ENST00000579077 105 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC090616.5-202ENST00000582111 297 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC022916.3-201ENST00000592961 742 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC008638.3-201ENST00000603341 463 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC128687.1-201ENST00000605304 619 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 BCRP9-201ENST00000605312 388 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC068276.1-201ENST00000605793 379 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 AC068137.4-201ENST00000638485 296 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 PNPT1P2-201ENST00000456768 2050 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RAB40AQ8WXH6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
RAB40AQ8WXH6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
RAB40AQ8WXH6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RAB40AQ8WXH6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
RAB40AQ8WXH6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AC010300.1-201ENST00000600671 5134 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 SNORD74.4-201ENST00000364129 80 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 RNY3P10-201ENST00000384764 102 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 BTF3L4P1-201ENST00000413813 468 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 RPL26P29-201ENST00000415623 438 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 MORF4L1P6-201ENST00000418771 268 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AL445669.1-201ENST00000426743 755 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AC109583.1-201ENST00000432156 268 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AL359265.2-201ENST00000434367 631 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 CDC27P1-201ENST00000445384 715 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AL353691.1-201ENST00000451332 387 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 AC010326.1-201ENST00000462726 602 ntBASIC3.96□□□□□ -1.78
RAB40AQ8WXH6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms