Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 SNORD39.4-201ENST00000620099 78 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 AC058791.1-201ENST00000608412 3198 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 MTND4P9-201ENST00000507819 1346 ntBASIC3.86□□□□□ -1.79
GABPAQ06546 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
GABPAQ06546 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
GABPAQ06546 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 AC090229.1-201ENST00000590983 1609 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 RNU6-1151P-201ENST00000384684 107 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 NUP35P2-201ENST00000416748 943 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.85□□□□□ -1.79
GABPAQ06546 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.85□□□□□ -1.79
GABPAQ06546 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.85□□□□□ -1.79
GABPAQ06546 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.85□□□□□ -1.79
GABPAQ06546 RPL23AP67-201ENST00000465341 474 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.85□□□□□ -1.79
GABPAQ06546 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.85□□□□□ -1.79
GABPAQ06546 AL136126.1-201ENST00000473603 402 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 RPS3AP43-201ENST00000479743 781 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC006445.1-201ENST00000491925 405 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.85□□□□□ -1.79
GABPAQ06546 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 AC026414.1-201ENST00000504046 698 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 PTGES3P3-201ENST00000511479 482 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.85□□□□□ -1.79
GABPAQ06546 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 RNU6-488P-201ENST00000515918 99 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC107934.2-201ENST00000518653 310 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.85□□□□□ -1.79
GABPAQ06546 AC104417.1-201ENST00000523974 751 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC074029.1-201ENST00000552531 1044 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC007424.1-203ENST00000554613 687 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 YWHAZP1-201ENST00000556286 722 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC141257.3-201ENST00000572906 215 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC015917.1-201ENST00000579654 510 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 RPAP2P1-201ENST00000603626 1168 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 AC009269.6-201ENST00000621778 588 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.85□□□□□ -1.79
GABPAQ06546 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.85□□□□□ -1.79
GABPAQ06546 AL136964.1-201ENST00000622038 2990 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 SGO1P1-201ENST00000603525 1447 ntBASIC3.85□□□□□ -1.79
GABPAQ06546 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.85□□□□□ -1.79
GABPAQ06546 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
GABPAQ06546 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.84□□□□□ -1.79
GABPAQ06546 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
GABPAQ06546 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GABPAQ06546 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 RNU6-298P-201ENST00000390888 96 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 SNORA48.5-201ENST00000391143 135 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 DSTNP4-201ENST00000399472 474 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 SFR1P1-201ENST00000403720 688 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 OR51A3P-201ENST00000413596 924 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 BTF3P8-201ENST00000414577 526 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 RPS15AP40-201ENST00000419621 391 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC012065.2-201ENST00000421295 375 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.84□□□□□ -1.79
GABPAQ06546 RPL23AP82-202ENST00000427528 469 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC008065.1-201ENST00000428525 348 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AL158071.1-201ENST00000430315 461 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AL513175.1-201ENST00000431492 780 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.84□□□□□ -1.79
GABPAQ06546 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.84□□□□□ -1.79
GABPAQ06546 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.84□□□□□ -1.79
GABPAQ06546 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 CENPBD1P1-201ENST00000464061 469 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.84□□□□□ -1.79
GABPAQ06546 AC020893.1-201ENST00000502452 580 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.84□□□□□ -1.79
GABPAQ06546 MTND2P26-201ENST00000528255 1029 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.84□□□□□ -1.79
GABPAQ06546 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
GABPAQ06546 EIF5A2P1-201ENST00000564027 460 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.84□□□□□ -1.79
GABPAQ06546 AP001542.2-201ENST00000593141 364 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC002487.1-201ENST00000604565 994 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AP004247.3-201ENST00000608682 624 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 uc_338.1-201ENST00000612113 180 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.84□□□□□ -1.79
GABPAQ06546 AC004808.1-201ENST00000627671 721 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC013437.2-201ENST00000639587 677 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.84□□□□□ -1.79
GABPAQ06546 AC095050.2-201ENST00000510748 1458 ntBASIC3.84□□□□□ -1.8
GABPAQ06546 AC138393.1-206ENST00000540997 1886 ntBASIC3.84□□□□□ -1.8
GABPAQ06546 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.83□□□□□ -1.8
GABPAQ06546 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms