Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IRF9Q00978 RNY1P12-201ENST00000364251 105 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 U3.29-201ENST00000391296 212 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 HSPD1P16-201ENST00000402302 394 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AL357515.1-201ENST00000402967 542 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.87□□□□□ -1.63
IRF9Q00978 MIR1178-201ENST00000408396 91 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 RNU2-41P-201ENST00000410991 178 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.87□□□□□ -1.63
IRF9Q00978 ELOCP4-201ENST00000420090 333 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC008065.1-201ENST00000428525 348 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.87□□□□□ -1.63
IRF9Q00978 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.87□□□□□ -1.63
IRF9Q00978 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.87□□□□□ -1.63
IRF9Q00978 KNOP1P3-201ENST00000446933 426 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC000111.2-201ENST00000448200 210 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.87□□□□□ -1.63
IRF9Q00978 AL591473.1-201ENST00000464297 313 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.87□□□□□ -1.63
IRF9Q00978 RPL36AP51-201ENST00000487216 318 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC008628.2-201ENST00000502605 298 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC025465.4-201ENST00000513422 638 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC046134.1-201ENST00000514454 666 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.87□□□□□ -1.63
IRF9Q00978 AC022790.1-201ENST00000522872 204 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AP003072.2-201ENST00000527756 676 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.87□□□□□ -1.63
IRF9Q00978 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.87□□□□□ -1.63
IRF9Q00978 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.87□□□□□ -1.63
IRF9Q00978 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
IRF9Q00978 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.87□□□□□ -1.63
IRF9Q00978 AC087477.6-201ENST00000559595 843 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.87□□□□□ -1.63
IRF9Q00978 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.87□□□□□ -1.63
IRF9Q00978 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.87□□□□□ -1.63
IRF9Q00978 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.87□□□□□ -1.63
IRF9Q00978 RPL26P30-202ENST00000602923 645 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC104260.1-201ENST00000616660 539 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AC022140.2-201ENST00000623500 188 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 AP003122.6-201ENST00000623831 495 ntBASIC4.87□□□□□ -1.63
IRF9Q00978 FER-210ENST00000628534 558 ntTSL 5 BASIC4.87□□□□□ -1.63
IRF9Q00978 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IRF9Q00978 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.87□□□□□ -1.63
IRF9Q00978 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.87□□□□□ -1.63
IRF9Q00978 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
IRF9Q00978 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
IRF9Q00978 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
IRF9Q00978 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 CBX3P1-201ENST00000325243 554 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 RNU6-169P-201ENST00000365336 107 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
IRF9Q00978 RPL7P60-201ENST00000397636 735 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 RPS4XP8-201ENST00000402039 771 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL592291.1-201ENST00000403830 352 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 AC092162.1-201ENST00000432828 434 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.86□□□□□ -1.63
IRF9Q00978 USP9YP8-201ENST00000441913 500 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 CALM1P1-201ENST00000442082 433 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.86□□□□□ -1.63
IRF9Q00978 FDX1P2-201ENST00000450769 375 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL353691.1-201ENST00000451332 387 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 RN7SL517P-201ENST00000462240 305 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC097484.1-201ENST00000471148 389 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AP000852.1-201ENST00000472460 573 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 OR2AO1P-201ENST00000476497 403 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC020890.1-201ENST00000491837 504 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 COX7A2P2-201ENST00000505291 250 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.86□□□□□ -1.63
IRF9Q00978 MTCO3P44-201ENST00000510977 541 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 RNA5SP337-201ENST00000517007 109 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.86□□□□□ -1.63
IRF9Q00978 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 OR5BC1P-201ENST00000529327 739 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
IRF9Q00978 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 CBX3P5-201ENST00000552017 521 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 MIR4719-201ENST00000585233 84 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC013244.1-201ENST00000604279 193 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 SUMO2P15-201ENST00000604285 278 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL009028.1-201ENST00000604895 802 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL136363.1-201ENST00000605349 337 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC009994.1-201ENST00000606889 253 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AC010424.2-201ENST00000607594 443 ntBASIC4.86□□□□□ -1.63
IRF9Q00978 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.86□□□□□ -1.63
IRF9Q00978 SDR42E1P1-201ENST00000611327 477 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms