Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
CCNA1P78396 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.72□□□□□ -1.81
CCNA1P78396 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCNA1P78396 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.72□□□□□ -1.81
CCNA1P78396 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCNA1P78396 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCNA1P78396 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCNA1P78396 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.71□□□□□ -1.81
CCNA1P78396 AL035425.3-201ENST00000564206 4996 ntBASIC3.71□□□□□ -1.81
CCNA1P78396 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.81
CCNA1P78396 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCNA1P78396 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.71□□□□□ -1.82
CCNA1P78396 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCNA1P78396 SNORA44-201ENST00000384584 132 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.71□□□□□ -1.82
CCNA1P78396 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
CCNA1P78396 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.71□□□□□ -1.82
CCNA1P78396 MTND4LP14-201ENST00000429447 288 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AL365396.1-201ENST00000430854 671 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 RPL23AP69-201ENST00000431134 458 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC009263.1-201ENST00000441193 1239 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC004865.1-201ENST00000442276 1003 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.71□□□□□ -1.82
CCNA1P78396 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCNA1P78396 ELOCP23-201ENST00000452014 332 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC087879.1-201ENST00000474343 374 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 RNU6-488P-201ENST00000515918 99 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.71□□□□□ -1.82
CCNA1P78396 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.71□□□□□ -1.82
CCNA1P78396 H3F3AP1-201ENST00000559984 334 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.71□□□□□ -1.82
CCNA1P78396 AC107954.1-201ENST00000565906 727 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AL590240.3-201ENST00000621416 943 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC092628.2-201ENST00000622492 339 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 AC110801.1-201ENST00000623590 212 ntBASIC3.71□□□□□ -1.82
CCNA1P78396 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.71□□□□□ -1.82
CCNA1P78396 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.71□□□□□ -1.82
CCNA1P78396 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCNA1P78396 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCNA1P78396 RPS4XP5-202ENST00000449995 1334 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 RIOK3P1-201ENST00000418778 1528 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 SEC63P2-201ENST00000503863 1939 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCNA1P78396 SNORA7.4-201ENST00000384249 137 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNA1P78396 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC107083.1-201ENST00000439643 279 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNA1P78396 XKRY2-201ENST00000442362 1093 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 MTCO3P16-201ENST00000454456 754 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 RPL12P22-201ENST00000519073 490 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.7□□□□□ -1.82
CCNA1P78396 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.7□□□□□ -1.82
CCNA1P78396 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCNA1P78396 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 MIR4474-201ENST00000579189 78 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 Z82195.1-201ENST00000604558 398 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNA1P78396 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNA1P78396 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNA1P78396 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCNA1P78396 AC068620.4-201ENST00000636730 1182 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCNA1P78396 MTND4P8-201ENST00000514997 1362 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.7□□□□□ -1.82
CCNA1P78396 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCNA1P78396 AL353746.1-201ENST00000566293 6881 ntBASIC3.7□□□□□ -1.82
CCNA1P78396 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCNA1P78396 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCNA1P78396 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCNA1P78396 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CCNA1P78396 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCNA1P78396 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.69□□□□□ -1.82
CCNA1P78396 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCNA1P78396 AC016716.1-201ENST00000265882 708 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCNA1P78396 RNU6-50P-201ENST00000362356 103 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 RNU1-70P-201ENST00000362618 164 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 HMGB3P18-201ENST00000406327 590 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.69□□□□□ -1.82
CCNA1P78396 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.69□□□□□ -1.82
CCNA1P78396 AL049610.1-201ENST00000423374 372 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.69□□□□□ -1.82
CCNA1P78396 USP9YP36-201ENST00000424581 829 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 AL590103.1-201ENST00000434488 307 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 UBE2V1P5-201ENST00000440070 405 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
CCNA1P78396 PTGES3P5-201ENST00000455109 434 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 AC092754.2-201ENST00000463506 460 ntBASIC3.69□□□□□ -1.82
CCNA1P78396 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms