Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ERCC3P19447 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
ERCC3P19447 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ERCC3P19447 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
ERCC3P19447 THAP12P5-201ENST00000405864 2275 ntBASIC5.96□□□□□ -1.45
ERCC3P19447 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.96□□□□□ -1.45
ERCC3P19447 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.96□□□□□ -1.46
ERCC3P19447 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 AC092681.1-201ENST00000297369 291 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 OR1S2-201ENST00000302592 978 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 RNU4-1-201ENST00000363925 141 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
ERCC3P19447 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 MIR19A-201ENST00000384878 82 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 RPL7P60-201ENST00000397636 735 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 RNU2-9P-201ENST00000410194 145 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
ERCC3P19447 CHEK2P3-201ENST00000416118 248 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.96□□□□□ -1.46
ERCC3P19447 RPL23AP30-201ENST00000432419 501 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.96□□□□□ -1.46
ERCC3P19447 AC093156.1-201ENST00000440382 670 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 RPL34P20-201ENST00000442771 351 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 KNOP1P3-201ENST00000446933 426 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AL049714.1-201ENST00000466686 347 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 IGBP1P4-201ENST00000503202 879 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.96□□□□□ -1.46
ERCC3P19447 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.96□□□□□ -1.46
ERCC3P19447 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.96□□□□□ -1.46
ERCC3P19447 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.96□□□□□ -1.46
ERCC3P19447 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.96□□□□□ -1.46
ERCC3P19447 RNU6-1281P-201ENST00000516223 105 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 Y_RNA.693-201ENST00000516641 110 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 OR4R3P-201ENST00000525084 838 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 AL157687.1-201ENST00000554853 619 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AC079075.1-201ENST00000559543 878 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.96□□□□□ -1.46
ERCC3P19447 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 RPL12P25-202ENST00000598100 674 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AL158211.4-201ENST00000606988 584 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AC245517.5-201ENST00000611529 162 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AC002553.4-201ENST00000616896 331 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 uc_338.7-201ENST00000621834 124 ntBASIC5.96□□□□□ -1.46
ERCC3P19447 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ERCC3P19447 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
ERCC3P19447 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
ERCC3P19447 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
ERCC3P19447 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.96□□□□□ -1.46
ERCC3P19447 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 AL138820.1-201ENST00000617901 5305 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ERCC3P19447 Y_RNA.88-201ENST00000363029 99 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 RNU5E-8P-201ENST00000363502 116 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 RNVU1-6-201ENST00000364688 164 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.95□□□□□ -1.46
ERCC3P19447 RN7SKP114-201ENST00000410327 279 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 RNU6-516P-201ENST00000411381 104 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 FAR2P2-201ENST00000413041 594 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC009237.5-201ENST00000414271 501 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 MTATP6P18-201ENST00000417994 673 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ERCC3P19447 FAR2P4-202ENST00000425399 584 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.95□□□□□ -1.46
ERCC3P19447 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.95□□□□□ -1.46
ERCC3P19447 GPR143P-201ENST00000434155 205 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 HMGB1P31-201ENST00000437242 427 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 DPPA3P1-201ENST00000448050 469 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC009220.1-201ENST00000451614 275 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 AC083899.1-201ENST00000454465 3819 ntBASIC5.95□□□□□ -1.46
ERCC3P19447 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms