Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC110801.1-201ENST00000623590 212 ntBASIC3.39□□□□□ -1.87
RETP07949 AL137790.1-201ENST00000634283 177 ntBASIC3.39□□□□□ -1.87
RETP07949 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RETP07949 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.39□□□□□ -1.87
RETP07949 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RETP07949 MTND4P34-201ENST00000572715 1371 ntBASIC3.38□□□□□ -1.87
RETP07949 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.38□□□□□ -1.87
RETP07949 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RETP07949 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RETP07949 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RETP07949 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
RETP07949 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RETP07949 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
RETP07949 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.38□□□□□ -1.87
RETP07949 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
RETP07949 RNA5SP432-201ENST00000362480 116 ntBASIC3.38□□□□□ -1.87
RETP07949 RNU6-98P-201ENST00000384173 107 ntBASIC3.38□□□□□ -1.87
RETP07949 RNU6-1005P-201ENST00000384519 107 ntBASIC3.38□□□□□ -1.87
RETP07949 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RETP07949 MIR1303-201ENST00000408625 86 ntBASIC3.38□□□□□ -1.87
RETP07949 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.38□□□□□ -1.87
RETP07949 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.38□□□□□ -1.87
RETP07949 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.38□□□□□ -1.87
RETP07949 AL031736.2-201ENST00000426573 787 ntBASIC3.38□□□□□ -1.87
RETP07949 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.38□□□□□ -1.87
RETP07949 AC109925.1-201ENST00000478069 331 ntBASIC3.38□□□□□ -1.87
RETP07949 AC021205.2-201ENST00000480069 347 ntBASIC3.38□□□□□ -1.87
RETP07949 AC093663.2-201ENST00000484625 313 ntBASIC3.38□□□□□ -1.87
RETP07949 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.38□□□□□ -1.87
RETP07949 HMGB3P15-201ENST00000507326 574 ntBASIC3.38□□□□□ -1.87
RETP07949 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.38□□□□□ -1.87
RETP07949 TMEM248P1-201ENST00000510579 951 ntBASIC3.38□□□□□ -1.87
RETP07949 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.38□□□□□ -1.87
RETP07949 RNU4-60P-201ENST00000517239 135 ntBASIC3.38□□□□□ -1.87
RETP07949 AP002404.1-201ENST00000532005 451 ntBASIC3.38□□□□□ -1.87
RETP07949 SYF2P1-201ENST00000550658 413 ntBASIC3.38□□□□□ -1.87
RETP07949 TRAV37-201ENST00000553906 342 ntBASIC3.38□□□□□ -1.87
RETP07949 MIR3945-201ENST00000581853 98 ntBASIC3.38□□□□□ -1.87
RETP07949 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.38□□□□□ -1.87
RETP07949 AL033523.1-201ENST00000605153 153 ntBASIC3.38□□□□□ -1.87
RETP07949 AC013412.1-201ENST00000610687 192 ntBASIC3.38□□□□□ -1.87
RETP07949 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.38□□□□□ -1.87
RETP07949 AC090617.9-201ENST00000623751 147 ntBASIC3.38□□□□□ -1.87
RETP07949 AC020923.1-201ENST00000624021 917 ntBASIC3.38□□□□□ -1.87
RETP07949 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.38□□□□□ -1.87
RETP07949 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RETP07949 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RETP07949 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.37□□□□□ -1.87
RETP07949 AC007656.2-201ENST00000624902 4547 ntBASIC3.37□□□□□ -1.87
RETP07949 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.37□□□□□ -1.87
RETP07949 OR5H2-201ENST00000355273 945 ntBASIC3.37□□□□□ -1.87
RETP07949 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RETP07949 MIR449A-201ENST00000362113 91 ntBASIC3.37□□□□□ -1.87
RETP07949 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
RETP07949 SKINT1L-201ENST00000401057 817 ntBASIC3.37□□□□□ -1.87
RETP07949 MTND4LP20-201ENST00000402379 270 ntBASIC3.37□□□□□ -1.87
RETP07949 HMGB3P18-201ENST00000406327 590 ntBASIC3.37□□□□□ -1.87
RETP07949 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
RETP07949 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.37□□□□□ -1.87
RETP07949 USP9YP19-201ENST00000412165 485 ntBASIC3.37□□□□□ -1.87
RETP07949 AC019070.1-201ENST00000415008 1024 ntBASIC3.37□□□□□ -1.87
RETP07949 HMGB1P45-201ENST00000435986 653 ntBASIC3.37□□□□□ -1.87
RETP07949 AC005002.1-201ENST00000447458 540 ntBASIC3.37□□□□□ -1.87
RETP07949 AC017099.1-201ENST00000448261 1028 ntBASIC3.37□□□□□ -1.87
RETP07949 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.37□□□□□ -1.87
RETP07949 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
RETP07949 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.37□□□□□ -1.87
RETP07949 CABYRP1-201ENST00000465493 1045 ntBASIC3.37□□□□□ -1.87
RETP07949 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.37□□□□□ -1.87
RETP07949 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.37□□□□□ -1.87
RETP07949 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.37□□□□□ -1.87
RETP07949 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.37□□□□□ -1.87
RETP07949 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.37□□□□□ -1.87
RETP07949 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
RETP07949 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
RETP07949 DUXAP6-201ENST00000553858 601 ntBASIC3.37□□□□□ -1.87
RETP07949 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.37□□□□□ -1.87
RETP07949 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.37□□□□□ -1.87
RETP07949 AC006539.2-201ENST00000601729 572 ntBASIC3.37□□□□□ -1.87
RETP07949 AC040174.2-201ENST00000602701 465 ntBASIC3.37□□□□□ -1.87
RETP07949 OR4H6P-202ENST00000603819 340 ntBASIC3.37□□□□□ -1.87
RETP07949 AC004775.1-201ENST00000607389 753 ntBASIC3.37□□□□□ -1.87
RETP07949 U6.48-201ENST00000618523 106 ntBASIC3.37□□□□□ -1.87
RETP07949 AL359757.2-201ENST00000624309 274 ntBASIC3.37□□□□□ -1.87
RETP07949 AL356094.1-201ENST00000624663 1212 ntBASIC3.37□□□□□ -1.87
RETP07949 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.37□□□□□ -1.87
RETP07949 ZNF90P1-201ENST00000480493 1951 ntBASIC3.37□□□□□ -1.87
RETP07949 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RETP07949 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RETP07949 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
RETP07949 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RETP07949 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RETP07949 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms