Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.57□□□□□ -2.16
APOBP04114 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.57□□□□□ -2.16
APOBP04114 HPRT1P3-201ENST00000539521 576 ntBASIC1.57□□□□□ -2.16
APOBP04114 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.57□□□□□ -2.16
APOBP04114 AC009318.2-201ENST00000610917 651 ntBASIC1.57□□□□□ -2.16
APOBP04114 U4.3-201ENST00000621047 82 ntBASIC1.57□□□□□ -2.16
APOBP04114 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOBP04114 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
APOBP04114 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 AC008264.2-201ENST00000610193 3731 ntBASIC1.56□□□□□ -2.16
APOBP04114 MIR221-201ENST00000385135 110 ntBASIC1.56□□□□□ -2.16
APOBP04114 MIR181B1-201ENST00000385240 110 ntBASIC1.56□□□□□ -2.16
APOBP04114 AC245291.1-201ENST00000419501 328 ntBASIC1.56□□□□□ -2.16
APOBP04114 FAR1P1-201ENST00000427163 934 ntBASIC1.56□□□□□ -2.16
APOBP04114 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.56□□□□□ -2.16
APOBP04114 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.56□□□□□ -2.16
APOBP04114 AC093673.2-201ENST00000609674 331 ntBASIC1.56□□□□□ -2.16
APOBP04114 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 RNA5SP383-201ENST00000362934 120 ntBASIC1.56□□□□□ -2.16
APOBP04114 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 SKINT1L-201ENST00000401057 817 ntBASIC1.56□□□□□ -2.16
APOBP04114 AL359511.1-201ENST00000402970 211 ntBASIC1.56□□□□□ -2.16
APOBP04114 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.56□□□□□ -2.16
APOBP04114 NPM1P49-201ENST00000448027 714 ntBASIC1.56□□□□□ -2.16
APOBP04114 AC010198.2-201ENST00000550612 259 ntBASIC1.56□□□□□ -2.16
APOBP04114 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.56□□□□□ -2.16
APOBP04114 LINC01355-201ENST00000566551 5444 ntBASIC1.56□□□□□ -2.16
APOBP04114 OR10AB1P-202ENST00000641219 1686 ntBASIC1.56□□□□□ -2.16
APOBP04114 MTCO1P7-201ENST00000419523 1542 ntBASIC1.56□□□□□ -2.16
APOBP04114 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.56□□□□□ -2.16
APOBP04114 MIR499A-201ENST00000384903 122 ntBASIC1.56□□□□□ -2.16
APOBP04114 RPL23AP70-201ENST00000483361 460 ntBASIC1.56□□□□□ -2.16
APOBP04114 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 AC091515.1-201ENST00000548110 679 ntBASIC1.56□□□□□ -2.16
APOBP04114 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.56□□□□□ -2.16
APOBP04114 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
APOBP04114 RNU1-35P-201ENST00000362782 153 ntBASIC1.56□□□□□ -2.16
APOBP04114 RNA5SP456-201ENST00000364002 114 ntBASIC1.56□□□□□ -2.16
APOBP04114 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
APOBP04114 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.56□□□□□ -2.16
APOBP04114 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.56□□□□□ -2.16
APOBP04114 RN7SKP82-201ENST00000516786 223 ntBASIC1.56□□□□□ -2.16
APOBP04114 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.56□□□□□ -2.16
APOBP04114 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.56□□□□□ -2.16
APOBP04114 AC099654.11-201ENST00000638857 294 ntBASIC1.56□□□□□ -2.16
APOBP04114 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 AC048351.1-201ENST00000420064 602 ntBASIC1.55□□□□□ -2.16
APOBP04114 PTP4A1P7-201ENST00000423476 514 ntBASIC1.55□□□□□ -2.16
APOBP04114 AC106872.3-201ENST00000495104 446 ntBASIC1.55□□□□□ -2.16
APOBP04114 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
APOBP04114 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.55□□□□□ -2.16
APOBP04114 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 MTND5P28-201ENST00000438005 1594 ntBASIC1.55□□□□□ -2.16
APOBP04114 FABP5P12-201ENST00000515543 389 ntBASIC1.55□□□□□ -2.16
APOBP04114 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
APOBP04114 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC1.55□□□□□ -2.16
APOBP04114 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 AP000526.1-201ENST00000603308 1388 ntBASIC1.55□□□□□ -2.16
APOBP04114 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 AL121882.1-201ENST00000422893 417 ntBASIC1.55□□□□□ -2.16
APOBP04114 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.55□□□□□ -2.16
APOBP04114 AC021146.5-201ENST00000503544 545 ntBASIC1.55□□□□□ -2.16
APOBP04114 AC096725.1-201ENST00000514266 313 ntBASIC1.55□□□□□ -2.16
APOBP04114 ACTR6P1-201ENST00000514311 1104 ntBASIC1.55□□□□□ -2.16
APOBP04114 TRAV11-201ENST00000539512 339 ntBASIC1.55□□□□□ -2.16
APOBP04114 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.55□□□□□ -2.16
APOBP04114 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 AC090115.4-201ENST00000609970 188 ntBASIC1.55□□□□□ -2.16
APOBP04114 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.55□□□□□ -2.16
APOBP04114 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 MAPK10-373ENST00000641983 6772 ntBASIC1.55□□□□□ -2.16
APOBP04114 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOBP04114 Y_RNA.118-201ENST00000363300 101 ntBASIC1.54□□□□□ -2.16
APOBP04114 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.54□□□□□ -2.16
APOBP04114 MORF4L1P6-201ENST00000418771 268 ntBASIC1.54□□□□□ -2.16
APOBP04114 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.54□□□□□ -2.16
APOBP04114 AL662791.1-201ENST00000441992 928 ntBASIC1.54□□□□□ -2.16
APOBP04114 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms