Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
HOXA2O43364 DOCK11P1-201ENST00000553480 5932 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXA2O43364 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXA2O43364 RNU1-150P-201ENST00000362491 162 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 Y_RNA.477-201ENST00000384352 108 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 RN7SKP286-201ENST00000410894 299 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 AC113412.1-201ENST00000425840 504 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 RPL12P17-201ENST00000432393 498 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 RHOT1P3-201ENST00000436571 331 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 AC127537.2-201ENST00000439258 465 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 AC105399.1-202ENST00000447303 205 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXA2O43364 snoU13.7-201ENST00000459220 104 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXA2O43364 AC007991.1-201ENST00000522680 631 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 AP001922.4-201ENST00000526967 290 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXA2O43364 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXA2O43364 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXA2O43364 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 AC110743.1-201ENST00000584870 478 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 AC025857.2-201ENST00000602711 238 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 HMGN2P28-201ENST00000606102 262 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXA2O43364 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.58□□□□□ -1.36
HOXA2O43364 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXA2O43364 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXA2O43364 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
HOXA2O43364 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
HOXA2O43364 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 AC092079.1-201ENST00000558620 1985 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 RNU6-200P-201ENST00000364743 107 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 RNU6-946P-201ENST00000383878 107 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 Y_RNA.555-201ENST00000384673 110 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 Y_RNA.562-201ENST00000384695 113 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 MIR143-201ENST00000385300 106 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA2O43364 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA2O43364 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HOXA2O43364 AL360081.1-201ENST00000428299 555 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA2O43364 AC011816.1-201ENST00000441346 546 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 CYCSP51-201ENST00000443545 318 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AL590664.1-201ENST00000448065 339 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 FABP5P13-201ENST00000452144 328 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AL354710.1-201ENST00000453641 246 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 CYCSP34-201ENST00000458172 304 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 RN7SL717P-201ENST00000478343 297 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA2O43364 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA2O43364 RNU6-138P-201ENST00000515952 107 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 SNORA40.14-201ENST00000516543 86 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AC040926.1-201ENST00000530195 238 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXA2O43364 AC096772.1-201ENST00000609146 564 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AL137067.2-201ENST00000621202 131 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 AL450226.2-201ENST00000622913 439 ntBASIC6.57□□□□□ -1.36
HOXA2O43364 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
HOXA2O43364 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXA2O43364 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
HOXA2O43364 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXA2O43364 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA2O43364 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
HOXA2O43364 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA2O43364 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
HOXA2O43364 AL122126.1-201ENST00000546905 1318 ntBASIC6.56□□□□□ -1.36
HOXA2O43364 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HOXA2O43364 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms