Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SNORA70.2-201ENST00000364506 135 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 RN7SKP226-201ENST00000364912 300 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 RNU6-769P-201ENST00000384407 104 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 RNU6-809P-201ENST00000384461 107 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 Y_RNA.604-201ENST00000410574 102 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 OR8G2P-201ENST00000412796 908 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 NPM1P34-201ENST00000428821 893 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 CBX1P1-201ENST00000440184 427 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC002553.2-201ENST00000453217 340 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC005008.1-201ENST00000456151 612 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 MTND6P6-201ENST00000478031 263 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 RN7SL809P-201ENST00000482040 297 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC108941.1-201ENST00000502853 530 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 NDUFB4P2-201ENST00000509515 391 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC021146.3-201ENST00000511911 260 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC090151.1-201ENST00000520784 730 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 MED28P5-201ENST00000528254 438 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 OR5AP1P-201ENST00000529730 940 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC137800.2-201ENST00000574375 120 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 SLC25A36P1-201ENST00000590111 465 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AL606834.2-201ENST00000602954 668 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 BPIFA4P-203ENST00000603168 689 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 BCRP9-201ENST00000605312 388 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AL109618.2-201ENST00000605527 211 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC103710.1-201ENST00000610003 901 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 MIR6864-201ENST00000617935 70 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 MIR6830-201ENST00000636015 70 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 PHKBP1-201ENST00000450951 1951 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 AC125257.1-201ENST00000560400 2930 ntBASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
PTPDC1A2A3K4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 RNA5SP372-201ENST00000390836 115 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC016769.3-201ENST00000396562 315 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 MIR548F1-201ENST00000408667 84 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 APOOP2-201ENST00000461561 539 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 RPL23AP65-201ENST00000475608 468 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC015795.1-201ENST00000513669 327 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 COX6CP8-201ENST00000522620 226 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC084757.1-201ENST00000559987 490 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC234778.2-201ENST00000566241 354 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 OR4G1P-201ENST00000588632 938 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC090578.1-201ENST00000604955 591 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC010857.1-201ENST00000606398 594 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AP002360.4-201ENST00000606980 481 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AL159169.3-201ENST00000608871 561 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC026951.1-201ENST00000559530 2459 ntBASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PTPDC1A2A3K4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PTPDC1A2A3K4 AP001273.1-201ENST00000624493 3152 ntBASIC5.23□□□□□ -1.57
PTPDC1A2A3K4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPDC1A2A3K4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PTPDC1A2A3K4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms